XLOC_025527 (BX649502.1)


Basic Information

Item Value
gene id XLOC_025527
gene name BX649502.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34158875 ~ 34159072 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050319
CCCAGCATTAGTCAGCTGTTCAGGCATTTTCAGTGCCTGTAACGGTGTTATACTGCTGGGACAGTGACCTGCCGCGGTCTGGCTCTAGATGGCGCTGTTGTAGCGTCTTTCAGAGTTCAGCTGGAGGCAGGAGAGCCCTCTGAGCTAGGACTGAGTCTGCTTCGCTGTGGCTCAGCCCTTGACAGGAGGCCTCACAGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082930

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050319 True 198 snoRNA 0.57 1 34158875 34159072

Neighbor

gene id symbol gene type direction distance location
XLOC_025525 NA coding upstream 11781 34140363 ~ 34147094 (+)
XLOC_025524 aldh3b1 coding upstream 29923 34120191 ~ 34128952 (+)
XLOC_025522 NA coding upstream 45174 34107202 ~ 34113701 (+)
XLOC_025523 si:dkey-204f11.3 coding upstream 46198 34111957 ~ 34112677 (+)
XLOC_025521 BX649502.3 coding upstream 79705 34078200 ~ 34079170 (+)
XLOC_025528 timm29 coding downstream 21763 34180835 ~ 34182587 (+)
XLOC_025529 dre-mir-181c coding downstream 38622 34197694 ~ 34197771 (+)
XLOC_025530 NA coding downstream 51821 34210893 ~ 34217224 (+)
XLOC_025531 slc25a23b coding downstream 61122 34220194 ~ 34230565 (+)
XLOC_025532 znf207a coding downstream 74957 34234029 ~ 34245025 (+)
XLOC_025429 BX649540.1 misc upstream 3909839 30248739 ~ 30249036 (+)
XLOC_025517 NA non-coding upstream 585359 33560092 ~ 33573516 (+)
XLOC_025516 CR396582.2 non-coding upstream 708656 33450100 ~ 33450219 (+)
XLOC_025533 NA non-coding downstream 90110 34249182 ~ 34250243 (+)
XLOC_025534 NA non-coding downstream 94485 34253557 ~ 34253946 (+)
XLOC_025535 BX470190.1 non-coding downstream 200143 34359215 ~ 34359332 (+)

Expression


Co-expression Network