XLOC_025529 (dre-mir-181c)


Basic Information

Item Value
gene id XLOC_025529
gene name dre-mir-181c
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 34197694 ~ 34197771 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050323
GGGTCCTGATTCACATTCATTGCTGTCGGTGGGTTTTATCTCTTCGACTCGCCGGACAATGAATGAGAACTACGGCTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082192

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050323 True 78 miRNA 0.50 1 34197694 34197771

Neighbor

gene id symbol gene type direction distance location
XLOC_025528 timm29 coding upstream 15107 34180835 ~ 34182587 (+)
XLOC_025526 carm1 coding upstream 25480 34149337 ~ 34172214 (+)
XLOC_025527 BX649502.1 coding upstream 38622 34158875 ~ 34159072 (+)
XLOC_025525 NA coding upstream 50600 34140363 ~ 34147094 (+)
XLOC_025524 aldh3b1 coding upstream 68742 34120191 ~ 34128952 (+)
XLOC_025530 NA coding downstream 13122 34210893 ~ 34217224 (+)
XLOC_025531 slc25a23b coding downstream 22423 34220194 ~ 34230565 (+)
XLOC_025532 znf207a coding downstream 36258 34234029 ~ 34245025 (+)
XLOC_025533 NA coding downstream 51411 34249182 ~ 34250243 (+)
XLOC_025534 NA coding downstream 55786 34253557 ~ 34253946 (+)
XLOC_025429 BX649540.1 misc upstream 3948658 30248739 ~ 30249036 (+)
XLOC_025522 NA non-coding upstream 83993 34107202 ~ 34113701 (+)
XLOC_025521 BX649502.3 non-coding upstream 118524 34078200 ~ 34079170 (+)
XLOC_025517 NA non-coding upstream 624178 33560092 ~ 33573516 (+)
XLOC_025535 BX470190.1 non-coding downstream 161444 34359215 ~ 34359332 (+)
XLOC_025538 NA non-coding downstream 535098 34732869 ~ 34733118 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location