Gene
RNA
| Item | Value |
|---|---|
| gene id | G641920 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 69768399 ~ 69769130 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU729495 | True | 624 | lncRNA | 0.42 | 3 | 69768399 | 69769130 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528361 | nfasc | coding | downstream | 85548 | 69554159 ~ 69682851 (-) |
| cntn2 | LOC106583505 | coding | downstream | 268071 | 69429692 ~ 69500328 (-) |
| chia.1 | LOC106583513 | coding | downstream | 344665 | 69419408 ~ 69423734 (-) |
| LOC110528357 | LOC106583514 | coding | downstream | 364858 | 69398112 ~ 69403541 (-) |
| LOC110528356 | LOC106583517 | coding | downstream | 376765 | 69382887 ~ 69391634 (-) |
| csf1a | csf1 | coding | upstream | 312903 | 70082033 ~ 70151213 (-) |
| LOC110528368 | abec2 | coding | upstream | 724030 | 70493160 ~ 70498739 (-) |
| LOC110528372 | LOC106583497 | coding | upstream | 869048 | 70638178 ~ 70650621 (-) |
| LOC118965315 | NA | coding | upstream | 908495 | 70677625 ~ 70678507 (-) |
| LOC110528374 | LOC106583494 | coding | upstream | 930350 | 70699480 ~ 70701885 (-) |
| G641918 | NA | non-coding | downstream | 5899 | 69758657 ~ 69762500 (-) |
| G641909 | NA | non-coding | downstream | 17765 | 69749147 ~ 69750634 (-) |
| G641908 | LOC106565096 | non-coding | downstream | 19257 | 69747695 ~ 69749142 (-) |
| G641855 | NA | non-coding | downstream | 103044 | 69664303 ~ 69665355 (-) |
| G641820 | NA | non-coding | downstream | 180605 | 69587402 ~ 69587794 (-) |
| G641935 | NA | non-coding | upstream | 21148 | 69790278 ~ 69791444 (-) |
| G642039 | NA | non-coding | upstream | 208249 | 69977379 ~ 69979216 (-) |
| G642082 | NA | non-coding | upstream | 255331 | 70024461 ~ 70026794 (-) |
| G642032 | NA | non-coding | upstream | 264387 | 70033517 ~ 70055838 (-) |
| G641364 | NA | other | downstream | 959250 | 68794594 ~ 68809149 (-) |
| G639226 | LOC106583551 | other | downstream | 2352309 | 67414856 ~ 67416090 (-) |
| LOC110528308 | LOC106583558 | other | downstream | 2492859 | 67245800 ~ 67276081 (-) |
| LOC110528300 | LOC106583565 | other | downstream | 2689340 | 67055190 ~ 67079126 (-) |
| G637722 | NA | other | downstream | 3491319 | 66276782 ~ 66277080 (-) |
| G641913 | NA | other | upstream | 38913 | 69808043 ~ 69811260 (-) |
| G642089 | NA | other | upstream | 288867 | 70057997 ~ 70061255 (-) |
| G643054 | NA | other | upstream | 486215 | 70255345 ~ 70258882 (-) |
| G643159 | NA | other | upstream | 637903 | 70407033 ~ 70408118 (-) |
| LOC110528382 | LOC106583486 | other | upstream | 1110781 | 70877584 ~ 70881519 (-) |
