Gene
RNA
| Item | Value |
|---|---|
| gene id | G642039 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 69977379 ~ 69979216 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: syntaxin-binding protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU729623 | True | 418 | lncRNA | 0.38 | 3 | 69977379 | 69979216 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528361 | nfasc | coding | downstream | 294528 | 69554159 ~ 69682851 (-) |
| cntn2 | LOC106583505 | coding | downstream | 477051 | 69429692 ~ 69500328 (-) |
| chia.1 | LOC106583513 | coding | downstream | 553645 | 69419408 ~ 69423734 (-) |
| LOC110528357 | LOC106583514 | coding | downstream | 573838 | 69398112 ~ 69403541 (-) |
| LOC110528356 | LOC106583517 | coding | downstream | 585745 | 69382887 ~ 69391634 (-) |
| csf1a | csf1 | coding | upstream | 102817 | 70082033 ~ 70151213 (-) |
| LOC110528368 | abec2 | coding | upstream | 513944 | 70493160 ~ 70498739 (-) |
| LOC110528372 | LOC106583497 | coding | upstream | 658962 | 70638178 ~ 70650621 (-) |
| LOC118965315 | NA | coding | upstream | 698409 | 70677625 ~ 70678507 (-) |
| LOC110528374 | LOC106583494 | coding | upstream | 720264 | 70699480 ~ 70701885 (-) |
| G641935 | NA | non-coding | downstream | 185935 | 69790278 ~ 69791444 (-) |
| G641920 | NA | non-coding | downstream | 208249 | 69768399 ~ 69769130 (-) |
| G641918 | NA | non-coding | downstream | 214879 | 69758657 ~ 69762500 (-) |
| G641909 | NA | non-coding | downstream | 226745 | 69749147 ~ 69750634 (-) |
| G641908 | LOC106565096 | non-coding | downstream | 228237 | 69747695 ~ 69749142 (-) |
| G642082 | NA | non-coding | upstream | 45245 | 70024461 ~ 70026794 (-) |
| G642032 | NA | non-coding | upstream | 54301 | 70033517 ~ 70055838 (-) |
| G643005 | NA | non-coding | upstream | 193182 | 70172398 ~ 70588245 (-) |
| G643055 | NA | non-coding | upstream | 277417 | 70256633 ~ 70259809 (-) |
| G641913 | NA | other | downstream | 166119 | 69808043 ~ 69811260 (-) |
| G641364 | NA | other | downstream | 1168230 | 68794594 ~ 68809149 (-) |
| G639226 | LOC106583551 | other | downstream | 2561289 | 67414856 ~ 67416090 (-) |
| LOC110528308 | LOC106583558 | other | downstream | 2701839 | 67245800 ~ 67276081 (-) |
| LOC110528300 | LOC106583565 | other | downstream | 2898320 | 67055190 ~ 67079126 (-) |
| G642089 | NA | other | upstream | 78781 | 70057997 ~ 70061255 (-) |
| G643054 | NA | other | upstream | 276129 | 70255345 ~ 70258882 (-) |
| G643159 | NA | other | upstream | 427817 | 70407033 ~ 70408118 (-) |
| LOC110528382 | LOC106583486 | other | upstream | 900695 | 70877584 ~ 70881519 (-) |
| LOC110528398 | LOC106583475 | other | upstream | 1220420 | 71198628 ~ 71207030 (-) |
