Gene
RNA
| Item | Value |
|---|---|
| gene id | G643713 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 71529396 ~ 71529634 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU731584 | True | 239 | lncRNA | 0.41 | 1 | 71529396 | 71529634 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528421 | LOC106583382 | coding | downstream | 30825 | 71496172 ~ 71498571 (-) |
| LOC110528414 | LOC106583457 | coding | downstream | 76710 | 71440153 ~ 71452686 (-) |
| LOC110528416 | LOC106583460 | coding | downstream | 99899 | 71420262 ~ 71429497 (-) |
| LOC110528417 | NA | coding | downstream | 109667 | 71416150 ~ 71419729 (-) |
| LOC110528412 | LOC106583462 | coding | downstream | 117128 | 71402972 ~ 71412268 (-) |
| LOC110529018 | LOC106583452 | coding | upstream | 6711 | 71536345 ~ 71612388 (-) |
| LOC100135991 | cacna1d | coding | upstream | 117769 | 71647403 ~ 71774345 (-) |
| LOC118965362 | NA | coding | upstream | 258892 | 71788526 ~ 71791153 (-) |
| LOC110528426 | LOC106583363 | coding | upstream | 300534 | 71830168 ~ 71839230 (-) |
| LOC110528428 | LOC106583447 | coding | upstream | 322116 | 71851750 ~ 71869526 (-) |
| G643648 | LOC106583456 | non-coding | downstream | 63234 | 71464796 ~ 71466162 (-) |
| LOC110528413 | LOC105016853 | non-coding | downstream | 126701 | 71398622 ~ 71402695 (-) |
| LOC110528411 | LOC106583463 | non-coding | downstream | 137294 | 71383561 ~ 71392197 (-) |
| G643582 | NA | non-coding | downstream | 237257 | 71289567 ~ 71292139 (-) |
| G643559 | LOC100136012 | non-coding | downstream | 287129 | 71242032 ~ 71242267 (-) |
| G643745 | NA | non-coding | upstream | 56307 | 71585941 ~ 71586499 (-) |
| G643758 | NA | non-coding | upstream | 83158 | 71612792 ~ 71613029 (-) |
| G643762 | NA | non-coding | upstream | 87778 | 71617412 ~ 71617637 (-) |
| G643854 | NA | non-coding | upstream | 299849 | 71829483 ~ 71829709 (-) |
| G643869 | NA | non-coding | upstream | 313010 | 71842644 ~ 71842891 (-) |
| LOC110528404 | LOC106583471 | other | downstream | 250616 | 71274346 ~ 71278978 (-) |
| LOC110528398 | LOC106583475 | other | downstream | 322589 | 71198628 ~ 71207030 (-) |
| LOC110528382 | LOC106583486 | other | downstream | 647971 | 70877584 ~ 70881519 (-) |
| G643159 | NA | other | downstream | 1121278 | 70407033 ~ 70408118 (-) |
| G643054 | NA | other | downstream | 1270514 | 70255345 ~ 70258882 (-) |
| G643823 | NA | other | upstream | 227285 | 71756919 ~ 71758810 (-) |
| G644738 | LOC106583443 | other | upstream | 514587 | 72044221 ~ 72073477 (-) |
| G645145 | NA | other | upstream | 1171075 | 72700709 ~ 72703722 (-) |
| G645156 | NA | other | upstream | 1188112 | 72717746 ~ 72718449 (-) |
| gnrh2 | gon2 | other | upstream | 1678326 | 73207930 ~ 73210424 (-) |
