G643823


Basic Information

Item Value
gene id G643823
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 71756919 ~ 71758810 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU731733
ctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatttttggcgtaaaagcaacacagctcatcaccctgaacacaccatccccactgtcaaacatggtggtggcagaatcatggtttgggcctgcttttcttcagcagggacaggtaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU731733 True 500 TUCP 0.44 2 71756919 71758810

Neighbor

gene id symbol gene type direction distance location
LOC110529018 LOC106583452 coding downstream 144531 71536345 ~ 71612388 (-)
LOC110528421 LOC106583382 coding downstream 258348 71496172 ~ 71498571 (-)
LOC110528414 LOC106583457 coding downstream 304233 71440153 ~ 71452686 (-)
LOC110528416 LOC106583460 coding downstream 327422 71420262 ~ 71429497 (-)
LOC110528417 NA coding downstream 337190 71416150 ~ 71419729 (-)
LOC118965362 NA coding upstream 29716 71788526 ~ 71791153 (-)
LOC110528426 LOC106583363 coding upstream 71358 71830168 ~ 71839230 (-)
LOC110528428 LOC106583447 coding upstream 92940 71851750 ~ 71869526 (-)
LOC110528427 LOC106583448 coding upstream 110802 71869612 ~ 71872601 (-)
LOC110528431 LOC106583445 coding upstream 163466 71922276 ~ 71934520 (-)
G643762 NA non-coding downstream 139282 71617412 ~ 71617637 (-)
G643758 NA non-coding downstream 143890 71612792 ~ 71613029 (-)
G643745 NA non-coding downstream 170420 71585941 ~ 71586499 (-)
G643713 NA non-coding downstream 227285 71529396 ~ 71529634 (-)
G643648 LOC106583456 non-coding downstream 290757 71464796 ~ 71466162 (-)
G643854 NA non-coding upstream 70673 71829483 ~ 71829709 (-)
G643869 NA non-coding upstream 83834 71842644 ~ 71842891 (-)
G643924 NA non-coding upstream 106391 71865201 ~ 71865817 (-)
LOC110528404 LOC106583471 other downstream 478139 71274346 ~ 71278978 (-)
LOC110528398 LOC106583475 other downstream 550112 71198628 ~ 71207030 (-)
LOC110528382 LOC106583486 other downstream 875494 70877584 ~ 70881519 (-)
G643159 NA other downstream 1348801 70407033 ~ 70408118 (-)
G643054 NA other downstream 1498037 70255345 ~ 70258882 (-)
G644738 LOC106583443 other upstream 285411 72044221 ~ 72073477 (-)
G645145 NA other upstream 941899 72700709 ~ 72703722 (-)
G645156 NA other upstream 958936 72717746 ~ 72718449 (-)
gnrh2 gon2 other upstream 1449150 73207930 ~ 73210424 (-)
G645928 NA other upstream 1935763 73694573 ~ 73694925 (-)

Expression


Co-expression Network