Gene
RNA
| Item | Value |
|---|---|
| gene id | G645364 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 73148685 ~ 73153955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: calpastatin 2 isoform X26 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU733591 | True | 504 | lncRNA | 0.42 | 2 | 73148685 | 73153955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pcsk1 | LOC106583415 | coding | downstream | 103858 | 73020932 ~ 73044827 (-) |
| ell2 | LOC106583416 | coding | downstream | 147975 | 72965547 ~ 73000710 (-) |
| nudt2 | nudt2 | coding | downstream | 249258 | 72894975 ~ 72899427 (-) |
| LOC110529025 | NA | coding | downstream | 259086 | 72888394 ~ 72889599 (-) |
| LOC110528454 | ubap1 | coding | downstream | 281961 | 72836699 ~ 72866724 (-) |
| LOC110528460 | NA | coding | upstream | 9074 | 73163029 ~ 73164232 (-) |
| zmat1 | LOC106583414 | coding | upstream | 43181 | 73197136 ~ 73206996 (-) |
| gnrh2 | gon2 | coding | upstream | 53975 | 73207930 ~ 73210424 (-) |
| LOC110528463 | LOC106583412 | coding | upstream | 63311 | 73217266 ~ 73287242 (-) |
| LOC110528465 | NA | coding | upstream | 134349 | 73288304 ~ 73299941 (-) |
| G645366 | NA | non-coding | downstream | 1917 | 73131526 ~ 73146768 (-) |
| G645368 | NA | non-coding | downstream | 3314 | 73141945 ~ 73145371 (-) |
| G645365 | NA | non-coding | downstream | 5551 | 73132457 ~ 73143134 (-) |
| G645380 | NA | non-coding | downstream | 18395 | 73128770 ~ 73130290 (-) |
| G645373 | NA | non-coding | downstream | 28505 | 73117208 ~ 73120180 (-) |
| G645362 | NA | non-coding | upstream | 5770 | 73159725 ~ 73161202 (-) |
| G645405 | NA | non-coding | upstream | 62620 | 73216575 ~ 73217235 (-) |
| G645431 | NA | non-coding | upstream | 120799 | 73274754 ~ 73275053 (-) |
| G645436 | NA | non-coding | upstream | 125072 | 73279027 ~ 73279356 (-) |
| G645438 | NA | non-coding | upstream | 127115 | 73281070 ~ 73281368 (-) |
| G645156 | NA | other | downstream | 430236 | 72717746 ~ 72718449 (-) |
| G645145 | NA | other | downstream | 444963 | 72700709 ~ 72703722 (-) |
| G644738 | LOC106583443 | other | downstream | 1082562 | 72044221 ~ 72073477 (-) |
| G643823 | NA | other | downstream | 1389875 | 71756919 ~ 71758810 (-) |
| LOC110528404 | LOC106583471 | other | downstream | 1869905 | 71274346 ~ 71278978 (-) |
| G645928 | NA | other | upstream | 540618 | 73694573 ~ 73694925 (-) |
| G646073 | NA | other | upstream | 656947 | 73810902 ~ 73811457 (-) |
| LOC110528488 | NA | other | upstream | 1952942 | 75106897 ~ 75107924 (-) |
| G649025 | NA | other | upstream | 2465370 | 75619325 ~ 75623983 (-) |
