G645362


Basic Information

Item Value
gene id G645362
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 73159725 ~ 73161202 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU733586
TGTTTTATTTACGACACTCAAATTCTACTCCTCAAGCGCCGAAGGCCGTTGCTTAAACAAAAGACAAAAAAAGAAGACTTGAGTCGAGGTTGAACACACATTCCAAAACTCAAGAGGTGGAAGGAGCTttgtaaaataaaattaaaaacacCTGCGCTGCTTTGTACAAGCGAAAGATGGTCCTAATATTACATGTGAAAATGTTTCTAAAATAGTATGACTTTCTTCCCTTTAACTGCAACACAGATATACAGTAAGTTCCCTATACCGAAAGACCCTCTTACacaaatgtattataatactgtcaTGTCTTGTTATAGGCATTCATTTAGGTTACCCCATGTTAGTTACAAAAAGTATTTTTCTGTTTTCGATTGTTGAGGGTGCCACAAGGAGTTACTCCAGACACATGAATGCTGAATACACACAACaccattattatttgtatttatttaattagaATTCCCATTTCCAAAATATCTCTCAAGTTTTAAGTTTGAGACCTGCACCTAAATATGTATAATTCTGTGATACCATTTTGGGGAAATAATCCACAAAGCTTTGGACTTTTTGACTAGAAGTGATAGCCCTTTAGACTGTGTAAATGACAGTGTCCTCATATCTAGAGCAAGTCTTTACAGTATACAAACAAAGACAGTTTACAGACATAGTGAATGCCTAAGTTAACTTCTGTGTCCACTTTCTGAAACCAATAAATGTTTTTATAAGGCAAAGTACACACATATATAAACCCTTCTTAATAGATATTGCTTTACAGAAAGTAAATATATAGAATTGCTCACAGATGCATCCATATCAAGCAGATCATTTCCTGTAAATCCTTTTATAAATCGTTTCAATATTGAGCAGACTATGCTGTACACTAGTGTATTATGGTGGGTGTCCACTTAAGAGAAAACTCACTCTTCTGTGTACAACAATATTGGACAGACGTCCCAATCCTACATAACCCCTATATACTGTTCCTAAACACATGACACTCACTATTACCCCCAACGCTGTAGCAATGTTGCAGCAACATCACTGCAACGTTGGGGCAATGCAGACAGTTAGCTAGGATGGACAGTCAGTCAGGCCACTTGAAAGGCAAAGCCCAGATTAAATTTTCCTTACAGGATTGGACAGATTCTCTGTTCAATCCTGGGAAATAAATCAGGACAaactccctccctcgctcgctctcgttccctctctttatTTTGCTCTCCTCATCTCAAATGAAAGAAACCAAAACCTAGTACAATCTTCTGTCATGTGCGAAACCAAGCAGGAAAGGCGTTGcacactgtggtgtgtgtgtgtgtgtgtgcacatgtgtgtaagtgtgtggtcatgttttttttaaatccagcATATGTTCTCCACCATTTAGAAAAATAGAGTCATTCACAGCAGCTCCCTCGAGTGGCGCCACCGTGTGGCAGGGGACTTGTAG
>TU733587
TGTTTTATTTACGACACTCAAATTCTACTCCTCAAGCGCCGAAGGCCGTTGCTTAAACAAAAGACAAAAAAAGAAGACTTGAGTCGAGGTTGAACACACATTCCAAAACTCAAGAGGTGGAAGGAGCTttgtaaaataaaattaaaaacacCTGCGCTGCTTTGTACAAGCGAAAGATGGTCCTAATATTACATGTGAAAATGTTTCTAAAATAGTATGACTTTCTTCCCTTTAACTGCAACACAGATATACAGTAAGTTCCCTATACCGAAAGACCCTCTTACacaaatgtattataatactgtcaTGTCTTGTTATAGGCATTCATTTAGGTTACCCCATGTTAGTTACAAAAAGTATTTTTCTGTTTTCGATTGTTGAGGGTGCCACAAGGAGTTACTCCAGACACATGAATGCTGAATACACACAACaccattattatttgtatttatttaattagaATTCCCATTTCCAAAATATCTCTCAAGTTTTAAGTTTGAGACCTGCACCTAAATATGTATAATTCTGTGATACCATTTTGGGGAAATAATCCACAAAGCTTTGGACTTTTTGACTAGAAGTGATAGCCCTTTAGACTGTGTAAATGACAGTGTCCTCATATCTAGAGCAAGTCTTTACAGTATACAAACAAAGACAGTTTACAGACATAGTGAATGCCTAAGTTAACTTCTGTGTCCACTTTCTGAAACCAATAAATGTTTTTATAAGGCAAAGTACACACATATATAAACCCTTCTTAATAGATATTGCTTTACAGAAAGTAAATATATAGAATTGCTCACAGATGCATCCATATCAAGCAGATCATTTCCTGTAAATCCTTTTATAAATCGTTTCAATATTGAGCAGACTATGCTGTACACTAGTGTATTATGGTGGGTGTCCACTTAAGAGAAAACTCACTCTTCTGTGTACAACAATATTGGACAGACGTCCCAATCCTACATAACCCCTATATACTGTTCCTAAACACATGACACTCACTATTACCCCCAACGCTGTAGCAATGTTGCAACAGTTAGCTAGGATGGACAGTCAGTCAGGCCACTTGAAAGGCAAAGCCCAGATTAAATTTTCCTTACAGGATTGGACAGATTCTCTGTTCAATCCTGGGAAATAAATCAGGACAaactccctccctcgctcgctctcgttccctctctttatTTTGCTCTCCTCATCTCAAATGAAAGAAACCAAAACCTAGTACAATCTTCTGTCATGTGCGAAACCAAGCAGGAAAGGCGTTGcacactgtggtgtgtgtgtgtgtgtgtgcacatgtgtgtaagtgtgtggtcatgttttttttaaatccagcATATGTTCTCCACCATTTAGAAAAATAGAGTCATTCACAGCAGCTCCCTCGAGTGGCGCCACCGTGTGGCAGGGGACTTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU733586 False 1456 lncRNA 0.38 2 73159725 73161202
TU733587 True 1425 lncRNA 0.38 3 73159725 73161202

Neighbor

gene id symbol gene type direction distance location
pcsk1 LOC106583415 coding downstream 114898 73020932 ~ 73044827 (-)
ell2 LOC106583416 coding downstream 159015 72965547 ~ 73000710 (-)
nudt2 nudt2 coding downstream 260298 72894975 ~ 72899427 (-)
LOC110529025 NA coding downstream 270126 72888394 ~ 72889599 (-)
LOC110528454 ubap1 coding downstream 293001 72836699 ~ 72866724 (-)
LOC110528460 NA coding upstream 1827 73163029 ~ 73164232 (-)
zmat1 LOC106583414 coding upstream 35934 73197136 ~ 73206996 (-)
gnrh2 gon2 coding upstream 46728 73207930 ~ 73210424 (-)
LOC110528463 LOC106583412 coding upstream 56064 73217266 ~ 73287242 (-)
LOC110528465 NA coding upstream 127102 73288304 ~ 73299941 (-)
G645364 NA non-coding downstream 5770 73148685 ~ 73153955 (-)
G645366 NA non-coding downstream 12957 73131526 ~ 73146768 (-)
G645368 NA non-coding downstream 14354 73141945 ~ 73145371 (-)
G645365 NA non-coding downstream 16591 73132457 ~ 73143134 (-)
G645380 NA non-coding downstream 29435 73128770 ~ 73130290 (-)
G645405 NA non-coding upstream 55373 73216575 ~ 73217235 (-)
G645431 NA non-coding upstream 113552 73274754 ~ 73275053 (-)
G645436 NA non-coding upstream 117825 73279027 ~ 73279356 (-)
G645438 NA non-coding upstream 119868 73281070 ~ 73281368 (-)
G645156 NA other downstream 441276 72717746 ~ 72718449 (-)
G645145 NA other downstream 456003 72700709 ~ 72703722 (-)
G644738 LOC106583443 other downstream 1093602 72044221 ~ 72073477 (-)
G643823 NA other downstream 1400915 71756919 ~ 71758810 (-)
LOC110528404 LOC106583471 other downstream 1880945 71274346 ~ 71278978 (-)
G645928 NA other upstream 533371 73694573 ~ 73694925 (-)
G646073 NA other upstream 649700 73810902 ~ 73811457 (-)
LOC110528488 NA other upstream 1945695 75106897 ~ 75107924 (-)
G649025 NA other upstream 2458123 75619325 ~ 75623983 (-)

Expression


Co-expression Network