G647976


Basic Information

Item Value
gene id G647976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 75261538 ~ 75264089 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU736442
CCTTGACTATTTCCAGATTGTTGGCAAAAAGCATGAATACATGGCTAGCTCTGTATTGAATTTGTCTGAGTGGAAATCCACCAATTTGATAGTCCTCCTGAGGTCTCACCATATCATGTCTCTGGACTTCTGAACAAGTTGTCCGTTCTCATCCACGTAGCGCTCTATCACCAGGTTACTGTTGGTGTCGTGGGCTGAATTGTAGTTGGTGACCAGTCGACAAGGAATGCCCAGGGCTCGTGAACTGAGCAGGCCACTGCTGCAAACACCCAGCATTGGCCAAAGCGCACAGGCTGACAGGCATTTGTGTCCCAGTTCCGGAGGATCTCCACACTACCCTTCCATGACAGAGGGCTCACCCCGCCGTCATAGTCATCAGTCCACCTGCCCAGCAAGACTCCCTTGTCGTCATTGCAGTTCACCTGGCACTGAGAACTCTGGACACATAGATTGGGTTTCTCCTCCCTGAAGCGTCTTTCCCAGGGTTACGCAGGCACTTCGGGTTCATATCCAGGATTCTCAGACAGGCATTCAGGATCCCATCCTCAAACTACATCACACAGAGAAAACCACACAAGGTCAAATCAACCTGCTATTTATTTTCAAACGGGAACTAAGCATGCAAAGGTGAGCAAAAGATCGAATAAAGATCAAAGGATTAGAAGTTTGCTTCTCGTCTTTGATTCTTTCCTGAAAATATCATGTGCAAATGTTTAGTAAAGCTGAACGCCAGTCATATGCATAAACAGTGTGCACGATATGCAACTATGACACACACCAAGTAGATAATGAGCTGTATCAACAATTGAACCTTGGTCTCACCATCTCAGTAGGATTATCATGATCTGTCAATTACACACAGATTGAACCAATGGAAGCATCTTGATGTGGAAAGAAAATAGCCTCAATTGGATTTTACCAGTCAACAGTTCTGTAACGGATCTCTTCGTCATCTGACGACAAGTATGAAATAttggaccaatgcgcagcgtggtaagtgtccatgttaatttattaactgaacacacaaaacaaaataatgaaGTGAATGGAAGAAATAAAACAGTTCTACAAGCtgacatacactaaacagaaaacaaccacccacaaacaagagtgggaaaacaggctacctaagtatggttcgattgacagctgcctttgattgggaaccataccaggccaaacacatagaaataccaaacatagaacaaaaacagtgaatgcccaccccaactcacgccctgaccaacctgaaatagaaacatacaaaaggaactaaggtcaggacgt

Function

NR:

description
PREDICTED: protein-glutamine gamma-glutamyltransferase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU736442 True 1293 lncRNA 0.44 3 75261538 75264089

Neighbor

gene id symbol gene type direction distance location
LOC110528488 NA coding downstream 153614 75106897 ~ 75107924 (-)
LOC110528483 LOC106583601 coding downstream 205807 74845476 ~ 75055731 (-)
LOC110528482 LOC106583600 coding downstream 424312 74829699 ~ 74837226 (-)
LOC110528480 LOC106583597 coding downstream 448176 74788801 ~ 74813362 (-)
trim107 LOC106583598 coding downstream 474161 74777397 ~ 74787377 (-)
LOC110528489 LOC106583603 coding upstream 12692 75276781 ~ 75314879 (-)
LOC110527148 LOC106583596 coding upstream 127615 75391704 ~ 75392659 (-)
LOC110528490 LOC106583604 coding upstream 221220 75485309 ~ 75491382 (-)
LOC110528491 LOC106583605 coding upstream 266288 75530377 ~ 75542507 (-)
trnaq-uug-2 NA coding upstream 443085 75707174 ~ 75707245 (-)
G647975 tgm2 non-coding downstream 4299 75247068 ~ 75257239 (-)
G647966 NA non-coding downstream 13585 75233513 ~ 75247953 (-)
G647927 NA non-coding downstream 90987 75170324 ~ 75170551 (-)
G647922 NA non-coding downstream 98328 75162999 ~ 75163210 (-)
G647919 NA non-coding downstream 100915 75160334 ~ 75160623 (-)
G648045 NA non-coding upstream 99353 75363442 ~ 75368846 (-)
G648075 NA non-coding upstream 155078 75419167 ~ 75421442 (-)
G648074 NA non-coding upstream 157957 75422046 ~ 75422881 (-)
G648097 NA non-coding upstream 190350 75454439 ~ 75454671 (-)
G648114 NA non-coding upstream 200361 75464450 ~ 75464769 (-)
G646073 NA other downstream 1450081 73810902 ~ 73811457 (-)
G645928 NA other downstream 1566613 73694573 ~ 73694925 (-)
gnrh2 gon2 other downstream 2051114 73207930 ~ 73210424 (-)
G645156 NA other downstream 2543089 72717746 ~ 72718449 (-)
G649025 NA other upstream 355236 75619325 ~ 75623983 (-)
G649327 LOC106583642 other upstream 950612 76214701 ~ 76220931 (-)
G649684 LOC100136508 other upstream 1749339 77009249 ~ 77016601 (-)
LOC110529034 LOC106583646 other upstream 2118578 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 2765155 78029244 ~ 78029753 (-)

Expression


Co-expression Network