G648097



Basic Information


Item Value
gene id G648097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 75454439 ~ 75454671 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU736570
tctgtcttacaatctctctccaccaggtgtagcacttctcccatcctttaaaaacaagaaatggacagtgactggggtaagggggggatacctagtcattttttgcatcatcattgcatgcgatcatcattctcaaagccgctgtttacttctgaagaaCACTTTAGCACCGTCCTAAAAACCTGATTCAAAtttgacacaaaccttcaaataggtatgtaatgacacgttat

Function


NR:

description
isobutyryl-CoA dehydrogenase, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU736570 True 233 lncRNA 0.41 1 75454439 75454671

Neighbor


gene id symbol gene type direction distance location
LOC110527148 LOC106583596 coding downstream 61780 75391704 ~ 75392659 (-)
LOC110528489 LOC106583603 coding downstream 139560 75276781 ~ 75314879 (-)
LOC110528488 NA coding downstream 346515 75106897 ~ 75107924 (-)
LOC110528483 LOC106583601 coding downstream 398708 74845476 ~ 75055731 (-)
LOC110528482 LOC106583600 coding downstream 617213 74829699 ~ 74837226 (-)
LOC110528490 LOC106583604 coding upstream 30638 75485309 ~ 75491382 (-)
LOC110528491 LOC106583605 coding upstream 75706 75530377 ~ 75542507 (-)
trnaq-uug-2 NA coding upstream 252503 75707174 ~ 75707245 (-)
LOC110528500 LOC106583615 coding upstream 592377 76047048 ~ 76060389 (-)
LOC110528501 LOC106565236 coding upstream 614404 76069075 ~ 76085739 (-)
G648074 NA non-coding downstream 31558 75422046 ~ 75422881 (-)
G648075 NA non-coding downstream 32997 75419167 ~ 75421442 (-)
G648045 NA non-coding downstream 85593 75363442 ~ 75368846 (-)
G647976 NA non-coding downstream 190350 75261538 ~ 75264089 (-)
G647975 tgm2 non-coding downstream 197200 75247068 ~ 75257239 (-)
G648114 NA non-coding upstream 9779 75464450 ~ 75464769 (-)
G648983 NA non-coding upstream 29263 75483934 ~ 75484191 (-)
G648984 NA non-coding upstream 34264 75488935 ~ 75540391 (-)
G648972 NA non-coding upstream 82490 75537161 ~ 75591273 (-)
G649036 NA non-coding upstream 137972 75592643 ~ 75593171 (-)
G646073 NA other downstream 1642982 73810902 ~ 73811457 (-)
G645928 NA other downstream 1759514 73694573 ~ 73694925 (-)
gnrh2 gon2 other downstream 2244015 73207930 ~ 73210424 (-)
G645156 NA other downstream 2735990 72717746 ~ 72718449 (-)
G649025 NA other upstream 164654 75619325 ~ 75623983 (-)
G649327 LOC106583642 other upstream 760030 76214701 ~ 76220931 (-)
G649684 LOC100136508 other upstream 1558757 77009249 ~ 77016601 (-)
LOC110529034 LOC106583646 other upstream 1927996 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 2574573 78029244 ~ 78029753 (-)

Expression



Co-expression Network