G649025


Basic Information

Item Value
gene id G649025
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 75619325 ~ 75623983 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU737600
atgtgccacacctgtcaggtagatggattatcttggcaaaggagaaatgctcactaacagggacgtaaacaaatttgtgcacaatttgagagaaCATTTCAGCTCTGGCACTTTCCAGCTACACCCTCAACCCCTCACCTGTCTCTGTCACGGGGTTTTCTATCAAAGCCCCTGGACTTGTCCTCTTCCAGCTGCCTCTGGAGTTTCTCCTCCACCTCCCGCTCCTTGGCTGCAGTGTCCACGGGCTTGGCTGCTCCGAAGATGGAGGCACGGCCGGAGCTGGGGGCAGTCGCTGGAGCAGCTGGGGCAGCTCCCCCACCACCGCTGCGGGCCTGCTCCTCTTCCTTGGGCGTGCTGCGTGGCTTCAGGACCAGCTTGGGTCTCTGGGTGGGACCctcaccacctctctcctcgCGCCTCTCATATCGGTCCTCTCGATCCCCGCCGTAGCGATCCCGATCCCCGTAGCGGCCACCACCACCCCCGTCATCATCACGGCGGTAGCCACTGCCAAAGGCACGTCGCCCGCCATCATCCCGGTCCCTGCGGGAGCCAAAGGCTCCCCGGTCGTCATAGCGGTCTCTGCCGCCGAAGCCGCGGTCTCTGCCGCCGTCCCGGTCGCCTCCAAATCCGCGGTCCCGGTCGCCGCCAAATCCGCGGTCCCGGTCGCTGCCAAAGCCGCGGTCCCGGTCACCGCCAAAGCCGCGGTCATTGTCCCGTCTCGGCCCGTCACGGTCTCCATAGCGGTCGCGT
>TU737599
ACCTCAGTTTGGGACATGCCGCGTCACTGGGTGAGACAGGGGTGGACCCAGCGCTCACCGCAGGGCGCTTGGCCCAGGCATTCTCCTTGGGTGGTGGTGCGGGCATCACCTTGAGGGGCTCCTTGGAGGAAGATGTGGAAGAGTTGGCGGAAGTAGGGCGAGCTCCGGGAGAGGGAGGGTCGTCCTCCTTACCACTGAATACTTCGTTCTCAACcgatcgctcgctcCTCACTCCTCCAACTTGGGTCCCTGTCTCTGTCACGGGGTTTTCTATCAAAGCCCCTGGACTTGTCCTCTTCCAGCTGCCTCTGGAGTTTCTCCTCCACCTCCCGCTCCTTGGCTGCAGTGTCCACGGGCTTGGCTGCTCCGAAGATGGAGGCACGGCCGGAGCTGGGGGCAGTCGCTGGAGCAGCTGGGGCAGCTCCCCCACCACCGCTGCGGGCCTGCTCCTCTTCCTTGGGCGTGCTGCGTGGCTTCAGGACCAGCTTGGGTCTCTGGGTGGGACCACC

Function

NR:

description
eukaryotic translation initiation factor 4B-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU737600 False 753 TUCP 0.64 3 75619325 75620937
TU737599 True 509 lncRNA 0.64 3 75620540 75623983

Neighbor

gene id symbol gene type direction distance location
LOC110528491 LOC106583605 coding downstream 78033 75530377 ~ 75542507 (-)
LOC110528490 LOC106583604 coding downstream 129158 75485309 ~ 75491382 (-)
LOC110527148 LOC106583596 coding downstream 227881 75391704 ~ 75392659 (-)
LOC110528489 LOC106583603 coding downstream 305661 75276781 ~ 75314879 (-)
LOC110528488 NA coding downstream 512616 75106897 ~ 75107924 (-)
trnaq-uug-2 NA coding upstream 83191 75707174 ~ 75707245 (-)
LOC110528500 LOC106583615 coding upstream 423065 76047048 ~ 76060389 (-)
LOC110528501 LOC106565236 coding upstream 445092 76069075 ~ 76085739 (-)
LOC110528502 LOC106565237 coding upstream 473180 76097163 ~ 76167318 (-)
LOC110528503 LOC106583643 coding upstream 554570 76178553 ~ 76192151 (-)
G649041 NA non-coding downstream 19370 75600910 ~ 75601170 (-)
G649036 NA non-coding downstream 27369 75592643 ~ 75593171 (-)
G648972 NA non-coding downstream 29267 75537161 ~ 75591273 (-)
G648984 NA non-coding downstream 80149 75488935 ~ 75540391 (-)
G648983 NA non-coding downstream 136349 75483934 ~ 75484191 (-)
G649027 NA non-coding upstream 1516 75625499 ~ 75629826 (-)
G649056 NA non-coding upstream 17927 75641910 ~ 75642242 (-)
G649057 NA non-coding upstream 18525 75642508 ~ 75643010 (-)
G649063 NA non-coding upstream 31427 75655410 ~ 75657318 (-)
G649067 NA non-coding upstream 40071 75664054 ~ 75664284 (-)
G646073 NA other downstream 1809083 73810902 ~ 73811457 (-)
G645928 NA other downstream 1925615 73694573 ~ 73694925 (-)
gnrh2 gon2 other downstream 2410116 73207930 ~ 73210424 (-)
G645156 NA other downstream 2902091 72717746 ~ 72718449 (-)
G649327 LOC106583642 other upstream 590718 76214701 ~ 76220931 (-)
G649684 LOC100136508 other upstream 1389445 77009249 ~ 77016601 (-)
LOC110529034 LOC106583646 other upstream 1758684 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 2405261 78029244 ~ 78029753 (-)
G650763 NA other upstream 2419316 78043299 ~ 78046469 (-)

Expression


Co-expression Network