G649063


Basic Information

Item Value
gene id G649063
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 75655410 ~ 75657318 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU737639
ATCCTAATTGTATCCCAATAATTTTTACCTGATAGTGAATTACCAAATCAATTAACAAAGAAAGTTCCAGAAAGCTCTCCTTCTATGGCCAGGCAGCATCGCATCAGTGGAAACCAAGACCGTTCACAGGGCAGGCAAGGTTGTAGCTAAACATGATGGTACAGGAGAACAAGATGTGGAAGGAGGTGCTGAAGCACTGCAGGGATCACGGACCTCACCAGCTTGCTGTCTAAGAGTGAGCAGCTCCAGATCCAGAAATTGATTCATTTAAATCGTGCCCAGAGAGACCAGTCCATGCTTCTTCAGTGGTTTCTGgatgtgggtgaacagggacccCTGGAGTACCAGGCCTGGACCGGGGAAAGGCTGCCCTACGCAACCCCCCCGCTGTTGGACCCTGGCCAGAGAGCGCAAGCTTTGGGGAACCAGGGACTGTAAGGAGAGGAGGAACTTCCTCTGTTACAAGTGATTTGGTAATTCATTATCATTGATGGGTAAAATTAGTTTTTAAATAACATAGGATACAATGTTTCATTGCTAATTAAAAAGGTTGACTGGAATTAGCTTTAAAAACCTAACAGGACCATCAGTGGAAGAGGACAGCACTATGATACAGTAAAATAGGCTACAATGAATAGTACATTGAACAATGTGTGCAACATACAGTaccaaaagcttggtggtttttgtgactgcactgtcttaaagtaatgatggactgtcgtttctctttggttatttgagttgttgttgccataatatggacttggtcttttaccaaatagggctatcttctgtataccacccctaccttgtcacaacacaactgattgtgtcagttgaatcagagaggtgcggggggctgccttaatcaacatccacgtcttcggcgcccggggaacagtgggttaaactgccttactcaggggcagaacgacactttttaccttgtcagcttagggattcgatccagaaacctttttggttactagcccaatgctaaccactaggctacctgctgcctcatTGAAGGTGGCGATTAGCAAAGAACTCCAGACTA
>TU737640
accctttgccttgatgacagctttgcacactcttggcattctctcaaccagcttcatgaggaatgcttatccaacagtcttgagttcccacatatgctgggcacttgttggctgcttttccgtcaGTGTGCGgtccaactcttcccaaaccatctcaattgaggttgggtgattgtggaggctttgaattaaataaatacatcacagacagtgtcaccagcaaagcacccccataccacctactccatgcttcatggtgggaaccacacatgcggagatcatccattcacttaatctgcgtctcacaaggacacggcggttggaaccaaaaaatgtAAATTTGGACTCAGgccatttccaccggtctaatgtccatttgcTTGTGTTTCGCGTCAGAAGCAAGTCCCTTCttcctattggtgtcctttaggagtggtttccttgcagcaatacaaccatgaaggtctgattcacgcagtctcctctgaacagttgatgttgagatgtgtctgttacttgagctctgtgaagcatttatttgggctgataTTTCTGAGGaaagtccaTTTTATactaccttcatgtcttaaagtaatgatggactgtcgtttctctttggttatttgagttgttgttgccataatatggacttggtcttttaccaaatagggctatcttctgtataccacccctaccttgtcacaacacaactgattgtgtcagttgaatcagagaggtgcggggggctgccttaatcaacatccacgtcttcggcgcccggggaacagtgggttaaactgccttactcaggggcagaacgacactttttaccttgtcagcttagggattcgatccagaaacctttttggttactagcccaatgctaaccactaggctacctgctgcctcatTGAAGGTGGCGATTAGCAAAGAACTCCAGACTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU737639 False 1060 lncRNA 0.45 3 75655410 75657318
TU737640 True 944 lncRNA 0.46 2 75655410 75656487

Neighbor

gene id symbol gene type direction distance location
LOC110528491 LOC106583605 coding downstream 112903 75530377 ~ 75542507 (-)
LOC110528490 LOC106583604 coding downstream 164028 75485309 ~ 75491382 (-)
LOC110527148 LOC106583596 coding downstream 262751 75391704 ~ 75392659 (-)
LOC110528489 LOC106583603 coding downstream 340531 75276781 ~ 75314879 (-)
LOC110528488 NA coding downstream 547486 75106897 ~ 75107924 (-)
trnaq-uug-2 NA coding upstream 49856 75707174 ~ 75707245 (-)
LOC110528500 LOC106583615 coding upstream 389730 76047048 ~ 76060389 (-)
LOC110528501 LOC106565236 coding upstream 411757 76069075 ~ 76085739 (-)
LOC110528502 LOC106565237 coding upstream 439845 76097163 ~ 76167318 (-)
LOC110528503 LOC106583643 coding upstream 521235 76178553 ~ 76192151 (-)
G649057 NA non-coding downstream 12400 75642508 ~ 75643010 (-)
G649056 NA non-coding downstream 13168 75641910 ~ 75642242 (-)
G649027 NA non-coding downstream 25584 75625499 ~ 75629826 (-)
G649025 NA non-coding downstream 31427 75619325 ~ 75623983 (-)
G649041 NA non-coding downstream 54240 75600910 ~ 75601170 (-)
G649067 NA non-coding upstream 6736 75664054 ~ 75664284 (-)
G649077 NA non-coding upstream 47459 75704777 ~ 75706871 (-)
G649093 NA non-coding upstream 51364 75708682 ~ 75708883 (-)
G649096 NA non-coding upstream 53955 75711273 ~ 75711472 (-)
G649111 NA non-coding upstream 72763 75730081 ~ 75730562 (-)
G646073 NA other downstream 1843953 73810902 ~ 73811457 (-)
G645928 NA other downstream 1960485 73694573 ~ 73694925 (-)
gnrh2 gon2 other downstream 2444986 73207930 ~ 73210424 (-)
G649327 LOC106583642 other upstream 557383 76214701 ~ 76220931 (-)
G649684 LOC100136508 other upstream 1356110 77009249 ~ 77016601 (-)
LOC110529034 LOC106583646 other upstream 1725349 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 2371926 78029244 ~ 78029753 (-)
G650763 NA other upstream 2385981 78043299 ~ 78046469 (-)

Expression


Co-expression Network