G649077


Basic Information

Item Value
gene id G649077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 75704777 ~ 75706871 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU737654
ACCATTTGTAGGCCTACAAACTTTCTCAGACACTTAAAATAGATTATTCCTGTCATATAAACTCCATATGAAAAATACAAACACGTACTTATTCAAAATATGTTTTCTTCATATAAAACACTCGATAACAAAACAGCAAAAAGAGTATAAAATAACCAAGTCTCAATAATGCAGTATACCTATACAAAACAAAATATGAGTGCTTGGTTATTGTCTTTGGCTTCAGTGAAACTGGTTTGCATACCTAGGCAATTAGACAATACGAATTTGTACCCCTTTAGTGTTGATGGAAGACTTTTTCTAATGTGATATTATAGTTGTCCTCAGATACCAGTAGGCGACTTCTTTCTCCAAGATAACACAGTAAAAATAAGATCATACAACTATTCAGTCTTTTCTTGCTGTATCCCATTCTGTGAAGCATGTTGAGCTGGGACTATTTTAAAGCTACAGTTGACTGCATGGTTCATTAGCAGGTTGATTTCATTTGCATATGAAATATAGTTTGATATCATATCAAAAACAAGTTTATCGGGGGAAGGATTCTTTACTGATTCTCAATGCGAGACCAATATTACTTACATGCTCACATTTAATAATTGCTACACAAAACTGCATAATGCACAATCATTAATAATGCATAAACATCATGTAGAAAAGCTATTTTAAGGTTTGGAAAATATTATTTGGGATACTGTGTGTGAATTAAACAAAGAAACCATAACAAAGACtatggtcatgttcattaggacaCGCAAGGAAAACCTTTTCAAAAgcaagtccaggtagtccctccctgtttcagttcgTTTGGTtattaatgaacatgacccaggaaaTGCTGACCTTTCAGTGCAACTATAAATGCAGTAAAATGACTCCCAATCCGCTTCCTATTTCTGACattccattacacacacacatagtgtataaaacattaagaactccTTCCTAATATAAAGTTGCACCCCCcgttttccctcagaacagcctcaactcgTCAGgtcatggattctacaaggtgttgaaagcggtccacagggatgctggcccatgttgactccaatgcttcccacagttgtgtcaagttggctggatggactttgggtggtggaccattcttgatacaaacgggaaactgttgagcatgaaaaaacccagcaacgttgcagttcttgacacaaaccagtgcgcctggcacatactaccataccctgttcaaaggcacttacattttttgtcttgcccattcaccctctgaatggcacacatacacaatccatgtctcaattgtctccatgcttaaaaatcattctttaacctgtctcctccacttcatctacactgatcgaAGTAGATTTAACAACTGACATCAATGAGGggtcCCTTTGTAATATACCGTCCTGATGGACATGATTGTGCCCAATCCGGTTCCTCACCAGTTGACAGCTGTCTTCAaacatgcaaaaacacacacaaacacactgaccaaTTTTGCAGACACACATACCCAAACCACCAATTTCCTTCCACACACCGATTTACACCCAGTTATGCCCTTTCTCTGTGGCCCCTGGGAGTCCTAACTCATCTGCGTTGCTGTTGCTGGGGCCCCAGCATGACCTTGTTGATGAAGTTGACGATGGCCACAGCCGGCTGCTCTGGGTCCATCTCGGCAAACAGGTGACACACATTCTCCGATGAGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU737654 True 1707 lncRNA 0.40 2 75704777 75706871

Neighbor

gene id symbol gene type direction distance location
LOC110528491 LOC106583605 coding downstream 162270 75530377 ~ 75542507 (-)
LOC110528490 LOC106583604 coding downstream 213395 75485309 ~ 75491382 (-)
LOC110527148 LOC106583596 coding downstream 312118 75391704 ~ 75392659 (-)
LOC110528489 LOC106583603 coding downstream 389898 75276781 ~ 75314879 (-)
LOC110528488 NA coding downstream 596853 75106897 ~ 75107924 (-)
trnaq-uug-2 NA coding upstream 303 75707174 ~ 75707245 (-)
LOC110528500 LOC106583615 coding upstream 340177 76047048 ~ 76060389 (-)
LOC110528501 LOC106565236 coding upstream 362204 76069075 ~ 76085739 (-)
LOC110528502 LOC106565237 coding upstream 390292 76097163 ~ 76167318 (-)
LOC110528503 LOC106583643 coding upstream 471682 76178553 ~ 76192151 (-)
G649067 NA non-coding downstream 40493 75664054 ~ 75664284 (-)
G649063 NA non-coding downstream 47459 75655410 ~ 75657318 (-)
G649057 NA non-coding downstream 61767 75642508 ~ 75643010 (-)
G649056 NA non-coding downstream 62535 75641910 ~ 75642242 (-)
G649027 NA non-coding downstream 74951 75625499 ~ 75629826 (-)
G649093 NA non-coding upstream 1811 75708682 ~ 75708883 (-)
G649096 NA non-coding upstream 4402 75711273 ~ 75711472 (-)
G649111 NA non-coding upstream 23210 75730081 ~ 75730562 (-)
G649121 NA non-coding upstream 42711 75749582 ~ 75781604 (-)
G649129 NA non-coding upstream 61291 75768162 ~ 75776097 (-)
G649025 NA other downstream 83840 75619325 ~ 75623983 (-)
G646073 NA other downstream 1893320 73810902 ~ 73811457 (-)
G645928 NA other downstream 2009852 73694573 ~ 73694925 (-)
gnrh2 gon2 other downstream 2494353 73207930 ~ 73210424 (-)
G649327 LOC106583642 other upstream 507830 76214701 ~ 76220931 (-)
G649684 LOC100136508 other upstream 1306557 77009249 ~ 77016601 (-)
LOC110529034 LOC106583646 other upstream 1675796 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 2322373 78029244 ~ 78029753 (-)
G650763 NA other upstream 2336428 78043299 ~ 78046469 (-)

Expression


Co-expression Network