Gene
RNA
| Item | Value |
|---|---|
| gene id | G649762 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 77077732 ~ 77078699 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: casein kinase II subunit alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU738411 | True | 681 | lncRNA | 0.41 | 2 | 77077732 | 77078699 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528518 | NA | coding | downstream | 70589 | 77006314 ~ 77007143 (-) |
| LOC110529031 | LOC106583629 | coding | downstream | 98577 | 76793582 ~ 76979155 (-) |
| LOC110528515 | LOC106583630 | coding | downstream | 284583 | 76739000 ~ 76793149 (-) |
| LOC110528513 | LOC106583633 | coding | downstream | 418117 | 76608462 ~ 76659615 (-) |
| LOC110528512 | LOC106583634 | coding | downstream | 469685 | 76470081 ~ 76608047 (-) |
| LOC118965366 | LOC106565264 | coding | upstream | 10109 | 77088808 ~ 77090373 (-) |
| LOC110528526 | NA | coding | upstream | 27442 | 77106141 ~ 77111927 (-) |
| si:ch73-267c23.10 | LOC106583622 | coding | upstream | 42912 | 77121611 ~ 77145722 (-) |
| LOC110528532 | fndc11 | coding | upstream | 108964 | 77187663 ~ 77197139 (-) |
| LOC110529033 | LOC106583621 | coding | upstream | 139361 | 77218060 ~ 77231065 (-) |
| G649752 | NA | non-coding | downstream | 18161 | 77059371 ~ 77059571 (-) |
| G649739 | NA | non-coding | downstream | 23994 | 77036979 ~ 77053738 (-) |
| G649736 | NA | non-coding | downstream | 46909 | 77030354 ~ 77030823 (-) |
| G649684 | LOC100136508 | non-coding | downstream | 61131 | 77009249 ~ 77016601 (-) |
| G649728 | NA | non-coding | downstream | 81763 | 76993162 ~ 76995969 (-) |
| G649783 | NA | non-coding | upstream | 36470 | 77115169 ~ 77116250 (-) |
| G649806 | NA | non-coding | upstream | 69780 | 77148479 ~ 77148736 (-) |
| G649808 | NA | non-coding | upstream | 70690 | 77149389 ~ 77149609 (-) |
| G649810 | LOC107756720 | non-coding | upstream | 72723 | 77151422 ~ 77152847 (-) |
| G649815 | NA | non-coding | upstream | 79727 | 77158426 ~ 77158650 (-) |
| G649327 | LOC106583642 | other | downstream | 856801 | 76214701 ~ 76220931 (-) |
| G649025 | NA | other | downstream | 1456795 | 75619325 ~ 75623983 (-) |
| LOC110528488 | NA | other | downstream | 1969816 | 75106897 ~ 75107924 (-) |
| G646073 | NA | other | downstream | 3266275 | 73810902 ~ 73811457 (-) |
| LOC110529034 | LOC106583646 | other | upstream | 303968 | 77380754 ~ 77390369 (-) |
| G650755 | cbfa2t2 | other | upstream | 950545 | 78029244 ~ 78029753 (-) |
| G650763 | NA | other | upstream | 964600 | 78043299 ~ 78046469 (-) |
| eya2 | LOC106583664 | other | upstream | 1197449 | 78209092 ~ 78312601 (-) |
| G652578 | ncoa5 | other | upstream | 2375376 | 79454075 ~ 79457103 (-) |
