G649823



Basic Information


Item Value
gene id G649823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77166377 ~ 77166655 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU738483
TCCAAAGTTTTGccaaatggcttaagggcaacaaagtcaaggtattggagttgccatcacaaagccctgacctcaatcctatagaaaatttgtgagcagaactgaaaaagcgtgtgcgagcaaggaggcctacaaacctgactcagttacaccagctctgtcaggaggaatgggccaaaattcacccaacttattgtgggaagcttgtggaaggctacctgaaacgtttgacccaagttaaacaatttaaaggcaatgctgccaaacactaattgagtg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU738483 True 279 lncRNA 0.44 1 77166377 77166655

Neighbor


gene id symbol gene type direction distance location
si:ch73-267c23.10 LOC106583622 coding downstream 20655 77121611 ~ 77145722 (-)
LOC110528526 NA coding downstream 54450 77106141 ~ 77111927 (-)
LOC118965366 LOC106565264 coding downstream 76004 77088808 ~ 77090373 (-)
LOC110528518 NA coding downstream 159234 77006314 ~ 77007143 (-)
LOC110529031 LOC106583629 coding downstream 187222 76793582 ~ 76979155 (-)
LOC110528532 fndc11 coding upstream 21008 77187663 ~ 77197139 (-)
LOC110529033 LOC106583621 coding upstream 51405 77218060 ~ 77231065 (-)
helz2a helz2 coding upstream 83297 77249952 ~ 77275885 (-)
LOC118965318 NA coding upstream 134805 77301460 ~ 77304319 (-)
LOC110528536 arfrp1 coding upstream 182423 77349078 ~ 77355461 (-)
G649815 NA non-coding downstream 7727 77158426 ~ 77158650 (-)
G649810 LOC107756720 non-coding downstream 13530 77151422 ~ 77152847 (-)
G649808 NA non-coding downstream 16768 77149389 ~ 77149609 (-)
G649806 NA non-coding downstream 17641 77148479 ~ 77148736 (-)
G649783 NA non-coding downstream 50127 77115169 ~ 77116250 (-)
G649825 NA non-coding upstream 110 77166765 ~ 77167023 (-)
G649826 NA non-coding upstream 408 77167063 ~ 77167302 (-)
G649956 p2ry1 non-coding upstream 2127 77168782 ~ 77170571 (-)
G649958 NA non-coding upstream 4696 77171351 ~ 77171598 (-)
G649972 NA non-coding upstream 23172 77189827 ~ 77190084 (-)
G649684 LOC100136508 other downstream 149776 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 945446 76214701 ~ 76220931 (-)
G649025 NA other downstream 1545440 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 2058461 75106897 ~ 75107924 (-)
G646073 NA other downstream 3354920 73810902 ~ 73811457 (-)
LOC110529034 LOC106583646 other upstream 216012 77380754 ~ 77390369 (-)
G650755 cbfa2t2 other upstream 862589 78029244 ~ 78029753 (-)
G650763 NA other upstream 876644 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 1109493 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2287420 79454075 ~ 79457103 (-)

Expression



Co-expression Network