G649972



Basic Information


Item Value
gene id G649972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77189827 ~ 77190084 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU738661
ctgtatctttgttgtgactgggtgtgttgGCACATGATCCAATGTGTAAttgataacttcaccatgctcaaagggatattcaatgtctgatttttttgtttttaccaacctaccaataggtgcccttcttggGACGCATTGGAAAACctgcctggtctttgtggttgaatctgtgtttgaaattcactgctctactgagggaccttacatttaattgtgtggggtacagagatgaggtagtcattaaaaaatcatgat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU738661 True 258 lncRNA 0.40 1 77189827 77190084

Neighbor


gene id symbol gene type direction distance location
si:ch73-267c23.10 LOC106583622 coding downstream 44105 77121611 ~ 77145722 (-)
LOC110528526 NA coding downstream 77900 77106141 ~ 77111927 (-)
LOC118965366 LOC106565264 coding downstream 99454 77088808 ~ 77090373 (-)
LOC110528518 NA coding downstream 182684 77006314 ~ 77007143 (-)
LOC110529031 LOC106583629 coding downstream 210672 76793582 ~ 76979155 (-)
LOC110529033 LOC106583621 coding upstream 27976 77218060 ~ 77231065 (-)
helz2a helz2 coding upstream 59868 77249952 ~ 77275885 (-)
LOC118965318 NA coding upstream 111376 77301460 ~ 77304319 (-)
LOC110528536 arfrp1 coding upstream 158994 77349078 ~ 77355461 (-)
LOC110529034 LOC106583646 coding upstream 190670 77380754 ~ 77390369 (-)
G649958 NA non-coding downstream 18229 77171351 ~ 77171598 (-)
G649956 p2ry1 non-coding downstream 19256 77168782 ~ 77170571 (-)
G649826 NA non-coding downstream 22525 77167063 ~ 77167302 (-)
G649825 NA non-coding downstream 22804 77166765 ~ 77167023 (-)
G649823 NA non-coding downstream 23172 77166377 ~ 77166655 (-)
G649984 NA non-coding upstream 4458 77194542 ~ 77195013 (-)
G649985 NA non-coding upstream 5460 77195544 ~ 77195885 (-)
G649991 NA non-coding upstream 12310 77202394 ~ 77202734 (-)
G649994 NA non-coding upstream 15037 77205121 ~ 77206741 (-)
G649997 NA non-coding upstream 21847 77211931 ~ 77212307 (-)
G649684 LOC100136508 other downstream 173226 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 968896 76214701 ~ 76220931 (-)
G649025 NA other downstream 1568890 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 2081911 75106897 ~ 75107924 (-)
G646073 NA other downstream 3378370 73810902 ~ 73811457 (-)
G650755 cbfa2t2 other upstream 839160 78029244 ~ 78029753 (-)
G650763 NA other upstream 853215 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 1086064 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2263991 79454075 ~ 79457103 (-)

Expression



Co-expression Network