G649985



Basic Information


Item Value
gene id G649985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77195544 ~ 77195885 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU738677
cacattgaatcatgtagtaaccaaaaaagtgttaaacaaatcaaaataaatattttagattcttcaaagtagtcacgctttgccttgatgacagctttgcacagtcttggcattctctcaaccagcttcatgaggaatgtttttttaacaatcttgaagtagttcccacatatgctaagcacttgttggttgcttttccttcactctgcggtccaactcatcccaaaccatctcaattggtttgaggtcgggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttcctggtcaaatagcccttatacacctggaggtgttttgggtc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU738677 True 342 lncRNA 0.42 1 77195544 77195885

Neighbor


gene id symbol gene type direction distance location
si:ch73-267c23.10 LOC106583622 coding downstream 49822 77121611 ~ 77145722 (-)
LOC110528526 NA coding downstream 83617 77106141 ~ 77111927 (-)
LOC118965366 LOC106565264 coding downstream 105171 77088808 ~ 77090373 (-)
LOC110528518 NA coding downstream 188401 77006314 ~ 77007143 (-)
LOC110529031 LOC106583629 coding downstream 216389 76793582 ~ 76979155 (-)
LOC110529033 LOC106583621 coding upstream 22175 77218060 ~ 77231065 (-)
helz2a helz2 coding upstream 54067 77249952 ~ 77275885 (-)
LOC118965318 NA coding upstream 105575 77301460 ~ 77304319 (-)
LOC110528536 arfrp1 coding upstream 153193 77349078 ~ 77355461 (-)
LOC110529034 LOC106583646 coding upstream 184869 77380754 ~ 77390369 (-)
G649984 NA non-coding downstream 531 77194542 ~ 77195013 (-)
G649972 NA non-coding downstream 5460 77189827 ~ 77190084 (-)
G649958 NA non-coding downstream 23946 77171351 ~ 77171598 (-)
G649956 p2ry1 non-coding downstream 24973 77168782 ~ 77170571 (-)
G649826 NA non-coding downstream 28242 77167063 ~ 77167302 (-)
G649991 NA non-coding upstream 6509 77202394 ~ 77202734 (-)
G649994 NA non-coding upstream 9236 77205121 ~ 77206741 (-)
G649997 NA non-coding upstream 16046 77211931 ~ 77212307 (-)
G649978 LOC106583651 non-coding upstream 92482 77288367 ~ 77344077 (-)
G650044 NA non-coding upstream 183571 77379456 ~ 77380682 (-)
G649684 LOC100136508 other downstream 178943 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 974613 76214701 ~ 76220931 (-)
G649025 NA other downstream 1574607 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 2087628 75106897 ~ 75107924 (-)
G646073 NA other downstream 3384087 73810902 ~ 73811457 (-)
G650755 cbfa2t2 other upstream 833359 78029244 ~ 78029753 (-)
G650763 NA other upstream 847414 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 1080263 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2258190 79454075 ~ 79457103 (-)

Expression



Co-expression Network