G650044


Basic Information

Item Value
gene id G650044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 77379456 ~ 77380682 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU738737
TTGGATATGCTTTATTTTCCAGAAGCCAGCAGATGGAGCCAAAGGTCTCTAATGTGAAGGACAGAAGTTACATTGGGATTGTGAAAACATAGcgataactgccaaaataatgaaaACAATTGAGAAAATGTggtatacaaagtatattgaaagcaggtgcttccgtACAGGTGTGGTTCCTAAGTTAATTAAGCaaataacatcccatcatgcttagggtcatgtataaaaatgcCCATAGAATGACAATGCtcccatccacagggcatgagtggtcactgaatggtttgatgagcatgaaaatgatttaaaccatatgccatggcttttttagtcaccagatctcaacccaattgaacacttatgggagattctggagcggggCCTTGAGACAgggttttccaccaccatcaacaaaacatcaaattatggaatttcttgtggaagaatggtgtctcatccctccaatagagttacactagaatctatgccaaagtgcattgaagctgttgGTGTATGTTGGTGTTCCCTTTATTTCGGCATTTACCTGTACCTGATACTATCCGGAAACAATAGGAATAATAAGCTAATAAAGTTTTATAAAATGATGTTTAAAAACAGCTTTAATAAAGCATTAGAGCATAATTTCTAACAAGATTTAAGCTAGTTTAAAACACAGAGCCTTAGGCTgcctgtgtaaactcagCGAAAGTAGCCTAGATGGGACATATTTTAATATCCAAACAAGGAACCTTATTATTTAACAGAAGAGAACATAGAGGATAGTGGCTCTGTCCGGTAACAGTGGGTGAAAGGTAAATACTGTACATACTCTTGGAAATTAGATCTCAACAATATTCCTCTACTTCTAGCATTAAGTCATTTATACCTGAAACTTACACCTATTCAATCCAGCTGTGCCCTACAGCAGCTACTATGTTACGTAGGTGGTATTTTCCTAAAGCTGTAAGGTTTAACGTGCTCTTAAATCTTGTTGTAATCAACACATTTTCACGTTGACTTTCACGTTTTTATCCTCTTTCTCTGTGCTGTAGTGCTGTTGTTTTTTCACTTGCAAGAAAACTAAAATTCACAATGCAGACGTTTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU738737 True 1108 lncRNA 0.37 3 77379456 77380682

Neighbor

gene id symbol gene type direction distance location
LOC110528536 arfrp1 coding downstream 23995 77349078 ~ 77355461 (-)
LOC118965318 NA coding downstream 75137 77301460 ~ 77304319 (-)
helz2a helz2 coding downstream 103571 77249952 ~ 77275885 (-)
LOC110529033 LOC106583621 coding downstream 148391 77218060 ~ 77231065 (-)
LOC110528532 fndc11 coding downstream 182317 77187663 ~ 77197139 (-)
LOC110529034 LOC106583646 coding upstream 72 77380754 ~ 77390369 (-)
LOC110528538 LOC106583648 coding upstream 24206 77404888 ~ 77463817 (-)
LOC110528539 LOC106583647 coding upstream 92021 77472703 ~ 77527363 (-)
LOC110528541 snta1 coding upstream 493930 77874612 ~ 77948295 (-)
necab3 necab3 coding upstream 694827 78075509 ~ 78130470 (-)
G649978 LOC106583651 non-coding downstream 35379 77288367 ~ 77344077 (-)
G649997 NA non-coding downstream 167149 77211931 ~ 77212307 (-)
G649994 NA non-coding downstream 172715 77205121 ~ 77206741 (-)
G649991 NA non-coding downstream 176722 77202394 ~ 77202734 (-)
G649985 NA non-coding downstream 183571 77195544 ~ 77195885 (-)
G650057 NA non-coding upstream 20880 77401562 ~ 77401987 (-)
G650058 NA non-coding upstream 30710 77411392 ~ 77411620 (-)
G650062 NA non-coding upstream 34342 77415024 ~ 77415235 (-)
G650064 NA non-coding upstream 35949 77416631 ~ 77416866 (-)
G649684 LOC100136508 other downstream 362855 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 1158525 76214701 ~ 76220931 (-)
G649025 NA other downstream 1758519 75619325 ~ 75623983 (-)
LOC110528488 NA other downstream 2271540 75106897 ~ 75107924 (-)
G646073 NA other downstream 3567999 73810902 ~ 73811457 (-)
G650755 cbfa2t2 other upstream 648562 78029244 ~ 78029753 (-)
G650763 NA other upstream 662617 78043299 ~ 78046469 (-)
eya2 LOC106583664 other upstream 895466 78209092 ~ 78312601 (-)
G652578 ncoa5 other upstream 2073393 79454075 ~ 79457103 (-)

Expression


Co-expression Network