XLOC_002560 (chd1)


Basic Information

Item Value
gene id XLOC_002560
gene name chd1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 6521376 ~ 6588793 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004762
CTCGCTCTCAGTGCTCGTGCGCGTCATGGCGGAGGCCGGCTGGTGTAGGATTTACAGCTGAAATATGCCTACTATCCCATCTGTTTTTCCGGCACATGGAATACTTAGAACCGCTTAGCATCTAAACCCAAGGCACTCTTAACCGTGGAGGGAAAATCCAGAAACTTCTCTCTCAGAATAAAGTGTACGAGTTTTCCGCGGAGTTCCCGAGCGACAGCGGCGATCATCAGAAAGAGTCGGAAAACAGCGCACAGGCAGACAGGTGAGCTGCCCTGAAGCGGCACACACAGACTGTTAGCATCTCATCAGGGACAAATCTTTAATATTTGATTGAGATGGATGGACGCAGCGAGGATGAAAGTGTCAGCAACAGCAGCGGAGAGTCCAGTAATTCAGATGATGAGTCCGGGTCAGGATCAGGTTCTGGCTCTGGCTCGAGTTCAAGCAGTAGCAGTTCTAGCAGCAGCCAATCAGGGAGCAGCGACTCAGGAAGTGGCTCAGATTCTGGAAGCCAGTCAGACTCGGACTCGGAGAAATCCAAGGAAAAGAACGATCAAGACAACAAAATCGATGGAGCAGCGTTTTGGAATTCCAACCCGAGTATCCTGACAGTGCAAAGGACGGCCATGCTCAGGAAGCAGCAGATCCAACAGCAGCAGCTCCAGCAGCAGAGCTCCTCAAACACCGGCTCAGATGAGGACTCTTCCAGTAGTGATGAGTCAGATGATGACTCAAAGAGCAGGAGTAAAGGgtcTGGATCAGACTCTGACTCAGGCTCGGGTTCAGGAAGTGGTTCCTCAGACTCTTCAGCAGAGGAGGAAGCGAATAGTGACGAGTCGGTGTCAGACTATGAGCCCAGTCACAAAGTCAAGAGCAGAAAACCTTCAAACAAGGCCAACGCCAGAAATGGGAGAAATAACAAAGCTCCCAAGAAGAAGCCCTCCCACTCTTCCTCAGATGATGAAGATGACTATAAAAAAGCTTTGGCAGGGCCCCGACGGCAGGCCACGGTCAACGTAAGCTACAAAGAAGATGAGGAGCTGAAGACCGATTCAGATGACCTGGTGGAGGTGTGCGGAGAGGATGTCCCGCCACCAGAGGAGGATGAGTTTGAGACACTGGAGAGAGTCATGGAAATGAGGATAGGCAGGAAAGGAGTAACCGGGGCTGTGACCACAGTATATGCTGTAGAGGCAGATGGTGATCCCAACGCCAACTTCGACCCCAACAGACAGCCAGGAGAGGTGCAATATTTGATCAAATGGAAGAACTGGTCTCACATTCACAACACTTGGGAGACGGAGGAGACACTCAAACAACAGAATGTGAAGGGCATGAAGAAACTGGACAACTTTAAGAAAAAAGAGCAGGAGAAAAAGAAATGGCTCAAAGCTGCCTCACCTGAGGACGTGGAGTACTTCAACTGTCAGCAGGAGCTCATGGATGACTTGCATTCTCAATATCAACTTGTGGAGAGAATTATTGGACATTCAAATCAGAAGTCTGCCGCAGGCTATCCAGATTACCTTTGTAAATGGCAGGGGTTGCCATACTCTGAGTGCAGCTGGGAAGACGGTGCTCTTATTTCTAAAAAGTTTCAAAAATGCATTGATGAATACATGAGCCGGAACCAGTGCAAAACCATCCCCTCCAGAGACTGCAAGGTTTTAAAACAGAGGCCACGGTTTGTTCCCATGAAGAAGCAACCTCATTacattggtggagaaggtttggAGCTGCGGGACTATCAGCTGGATGGTCTGAACTGGATGGCCCATTCTTGGTGCAAAGGAAACAGTTGTATCCTGGCAGACGAGATGGGTCTGGGCAAAACCATCCAGACCATCAGTTTCCTCAATTACTTGTTCCATGAGCACCAGCTTTACGGGCCGTTCCTTCTGGTGGTGCCACTGTCCACCCTCACATCCTGGCAGAGAGAGATACAGCTCTGGGCTCCTCTGATGAATGTTGTGGTGTACCTGGGAGATATCAACAGCAGAAACATGATTCGAACACATGAATGGATGCATCCGCAGACCAAACGACTGAAGTTGAACATTCTTCTGACTACATATGAAATTCTGCTGAAGGATAAGTCATTTTTAGGAAATGTAAGCTGGGCGTTCATTGGTGTAGACGAGGCCCATCGGCTGAAGAACGATGACTCTCTGCTCTACAAGACTATGATAGAGTTCAAGTCCAATCACAGGCTCCTGATCACTGGCACACCCCTCCAGAACTCCCTCAAAGAGCTCTGGTCTCTGCTACACTTCATCATGCCTGAAAAGTTTCACTCGTGGGAGATGTTTGAAGAGGAACATGGGAAAGGCAGGGATTCGGGCTACACAAGCCTTCATAAGGAGCTGGAGCCATTCCTGCTGCGCAGAGTAAAGAAGGATGTGGAGAAATCTCTGCCTGCCAAGGTGGAACAGATCCTCCGGGTGGAGATGAGCGCGGTTCAGAAACAATACTACAAGTGGATATTGACGAGAAACTATAAAGCCCTGAGTAAAGGCACTAAAGGAAGCACGTCAGGCTTTCTCAACATCATGATGGAGTTGAAGAAATGCTGTAACCACTGCTACCTCATTAAACCGCCTGACGACAACGAGTTCTACAACAGACAAGAAGGCCTACAGCACCTTGTTCGAAGTAGTGGGAAGCTGATCCTTCTGGATAAACTGCTGGTTCGGCTGAAGGAACGAGGGCACCGTGTGCTCATCTTCTCGCAGATGGTTCGGATGCTGGACATCCTGGCTGAATATCTGAAGTACCGGCAGTTCTTATTCCAGAGACTGGATGGTTCCATAAAGGGGGAAATGAGAAAGCAGGCTTTGGATCATTTTAATGCAGACGGCTCTGAGGATTTCTGTTTCCTGTTGTCCACACGAGCGGGTGGTCTGGGCATTAACCTGGCCTCTGCAGATACAGTGGTTATTTTTGACTCAGACTGGAACCCTCAGAATGACCTGCAGGCCCAGGCCAGAGCTCACAGGATTGGTCAGAAAAAACAGGTGAATATATACCGTCTGGTGACCAAGGGCTCAGTTGAGGAGGAAATTATTGAGCGAGCCAAGAAGAAAATGGTGCTGGACCATCTCGTCATTCAGAGGATGGACACCACGGGAAAGACTGTGCTTCATACGGGTGCTGCTCCTTCCAGTTCTACTCCATTCAACAAGGAGGAACTGTCAGCTATATTGAAGTTTGGTGCTGAAGAACTTTTCAAAGAGCCAGAAGGAGAGGAACAGGAACCTCAGGAGATGGATATCGATGAAATCCTGAAGAGAGCAGAAACCAGAGAGAATGACCCAGGACCATCGACTGTAGGAGAAGAGCTGCTCTCACAGTTTAAGGTGGCAAATTTCTCCATGATGGAAGATGAGGAAATTGACATGGACACAGAGAGGAATGACAGGAACTGGGATGACATTATCCCAGAGGATCATCGGAGGAGACTCGAAGAGGAGGAGCGACAGAAAGAGCTCGCAGAAATCTATTTACTGCCCCGAATGAGGAAATGCGCTAAACAGATGAACTTTAATGGAAATGAGGGCCGACGCAGCAGGAACAGACGATACTCTGCTTCAGACAGTGATTCAGTCTCTGACCGAAAGAGGCCCAAGAAGCGTGGAAGACCTCGAACTATCCCAAGAGAGAACATTAAAGGCTTCACTGATGCTGAGATACGAAGATTTATCAAGAGTTACAAAAAGTTTGGTGGCCCTTTAGAGAGACTTGATGCCATCGCTCGTGATGCAGAGTTGGTGGATAAATCGGAGCATGATCTGCGGCGGCTGGCTGAGACCGTACACAACGGCTGTTTAAGAACGCTAAAGGAGAACCCTTGTGGACCTGAGCGAACCTCAGGAGGCAGGCGAGGGAAGGTGAAAGGACCCACTTTCAGGATCTCAGGCGTTCAAGTCAATGCTAAGCTGGTGATCTCTCATGAGGAGGAGCTGGCTCCATTACATAAGGCCATTCCTGCTGACCCCGAGGAAAGGAAGAGgTATATAATCCCATGCCACTCAAAGGCAGCTCATTTTGACATTGAGTGGGGTAAAGAGGATGACTCCAGCCTGCTTATTGGCATTTATGAGTATGGGTATGGCAGCTGGGAGATGATCAAGATGGACCCGGACCTCAACCTCACACATAAGCTCCTTCCTGATGATCCTGACAAGAAGCCACAGGCCAAACAGCTGCAGACTCGAGCTGACTACCTCATCAAATTACTCAGCAAAGACCTCGCCAAGAAAGAAGCACAGAAACAGGCTGGCACTGCAAAATCACGCAACCGGAAACCACGGGGCAAAAAGAACAAAGCTGTAAAACCGAAGATGGAGGATGTGACGAACAGCCTGTCCTCTGCGCCGCCTTCAGATAAGAGCTCTGATGAAGAGGATGAGAAGGATGAAGAGGACAAGGAAACTCCTCCTCCCGTTAAGCTGCCGAACAGAAGAGCACGTGTACCAGAGCGGACCGTAATGGAAGAAGAAGATGACTCTGATGAGGATGAGCTTGAGGACGCAGCGCCAGTAGAGAAGGACACACCAGAGAAAGTTGTTAAAAAGGAAGTTAAGAAGGAGAAGAAAGAAGAGGGACGGGACAGCAAAGAGAGGGAAGTGAAGGAGAAGGAAATCAAACCAGAGCCTTTGCAAAGAGAGGATGATTCTCCAGCAGAGGCTGTCGATATAAAAGCAGAGAAGGCCGATACCCCTGTTCACACGCCCACAGGAGGAGACGCAATCCCACTGTCTGAGGAGTCTGAAGAACTGGACCAGAAAACCTTCAGTGTGTGTAAGGAGCGCATGAGGCCTGTGAAGGCTGCACTCAAGCAGTTAGATCGTCCGGAGAAAGGTCTGTCTGAGCGAGAGCAGCTGGAACACACGCGGCAATGCCTGATCAAAATAGGAGATCACATCACCGAGTGTCTGAGAGAATACACCAACCCCGAGCAGATCAAACAGTGGAGGAAAAATCTGTGGATATTCGTTTCAAAGTTCACAGAATTCGATGCAAGGAAACTGCATAAACTGTATAAGCACGCTATTAAGAAACGACAAGAAAATGCTCAGgcAGCAGAGCAGAACACTAGCACTGTAAATACACAAAGCTTTAAACATGCAGATGTTGAGCGGCTAAAGGAGTCTCAGCAGGACGAGAGCAGCAGAGACAGTTACAGCTCTGACAGACATCATTCATCTCGCTACCACGAACACAGCAAAGAGCATCATGCCAGCGACTCCTACAGGAAGAGCTCCGACTCCAGGAAAAGGCCCTATTCCTCCTTCAGCAACGGCAAAGACCACAGAGAGCGGGAGCGAGACCAGTACAGAGAGAGAGGAGAGCGGCCGGACAGCAGATACTACAGTGAGAGCAAGCACAGGAAGCTGGACGAGCACCGCTCCAGCAGGGAGCACCGATCAGAAAGCAACTCCAAGGACAGGACTCACTCGGAGCACCGCTTCCACTCTGAGCACCGCTCCGGCAGCTCCGACTACTCGCACCACAAATCCTCCCGGGACTATCGCTACCATTCAGACTGGCAGATGGAGCACCGCTCGCCCCGGGACCAGCGCTCGCCTATCGGACACCGCTCGCCCTTCGAGTACTCGTCCGACCACAAAAGCACACCGGAACAGGTCTGGAGCGGCCGCAAGACATAACGCTTCTCCTCCGATTAGCCATAGACACACATCACACAGGAATGCCTTAGGGGACTGTCAGCCGCTGCACCACTGGGAGGAAAACACAGAtcacatatttttgtatttaagagtCGGCGGCATTCTTTCCTAGGTGCTGcagagtaattttttttaattattatttttataaattgactACTTTCCTTTTCGTTTGTGGTTTTTTACTTTTGAAACAGACGAGTCCGTGTTTCGCTCTGCCGTGCGAATCTGGATCCCGACATACTCCCGTAAATAAACGCGGCGCAGCTTATTTAACATGTGTTGAGTGAAAGgacgctacacacacacacactcactcactcactcgcgtTTCGTCTTTAGTGGACGTAAAGGGTTTCTGTGCTGAAGGACTGGGGTTCACCTTCCAAAGTACCTCGTTTACAGTGTTTTGTGACCATTTTTTGCCAATTTTTATCTGtaatttttgttcagttttgttttctttccacCATGCTTGAATTATTTAAATCTGTCTCGGCTGTAAAATAATCTGGACTATTTTTAGTGCGCATCAGATAGTGTCACTTTTTCACATTGTACTACTGTAAATTATTGTATAAAGTAAATCAAATGGGCTTTTCTCAGGCTggtatttttttaactatttcccCATCAACTCAGGCTACTTTCTCTTTTCCTTCCTTTGTTTTTGGGACTAAATCTCAGTAGTTTTGAATAATGTAATGAGACTTGGGTGAATATTCCATGTGTGTTCATTCTGTAGGGAACGTCTTGTCGGTTGGATCCCCTCTTTTGTTTGATCACTATCTGTAAGTGACTCGGCCTCACTTTATAACGCCGTCATGTCGGAAAAAATTCAACGCGTGTAATTATAAAAAAGGACATGAAAGGGTCGATCATAGCTAGAGGCACTTATGAGCTCTCCTTTAGAACATTTCCATGATAATCTTTCCTCTTGTTTTCTATAAATGTTGGCAATAATGTACTATTTTCTATGCAGCCCGAGTGTTTCTCTGCTTGACTGGCCCGAGCGGGTCAGAATGCTGTTACAGGACATACTGATGTACATAGATCTCCTTCTATATTTCAAATCCAAATTTACACTGAAAATGCATGGatttttaaagtaattgttttatataattgtttataaaGTCATTAAACtcaaatcactgttttcacctgtAC
>TCONS_00004763
ATGGATGGACGCAGCGAGGATGAAAGTGTCAGCAACAGCAGCGGAGAGTCCAGTAATTCAGATGATGAGTCCGGGTCAGGATCAGGTTCTGGCTCTGGCTCGAGTTCAAGCAGTAGCAGTTCTAGCAGCAGCCAATCAGGGAGCAGCGACTCAGGAAGTGGCTCAGATTCTGGAAGCCAGTCAGACTCGGACTCGGAGAAATCCAAGGAAAAGAACGATCAAGACAACAAAATCGATGGAGCAGCGTTTTGGAATTCCAACCCGAGTATCCTGACAGTGCAAAGGACGGCCATGCTCAGGAAGCAGCAGATCCAACAGCAGCAGCTCCAGCAGCAGAGCTCCTCAAACACCGGCTCAGATGAGGACTCTTCCAGTAGTGATGAGTCAGATGATGACTCAAAGAGCAGGAGTAAAGGgtcTGGATCAGACTCTGACTCAGGCTCGGGTTCAGGAAGTGGTTCCTCAGACTCTTCAGCAGAGGAGGAAGCGAATAGTGACGAGTCGGTGTCAGACTATGAGCCCAGTCACAAAGTCAAGAGCAGAAAACCTTCAAACAAGGCCAACGCCAGAAATGGGAGAAATAACAAAGCTCCCAAGAAGAAGCCCTCCCACTCTTCCTCAGATGATGAAGATGACTATAAAAAAGCTTTGGCAGGGCCCCGACGGCAGGCCACGGTCAACGTAAGCTACAAAGAAGATGAGGAGCTGAAGACCGATTCAGATGACCTGGTGGAGGTGTGCGGAGAGGATGTCCCGCCACCAGAGGAGGATGAGTTTGAGACACTGGAGAGAGTCATGGAAATGAGGATAGGCAGGAAAGGAGTAACCGGGGCTGTGACCACAGTATATGCTGTAGAGGCAGATGGTGATCCCAACGCCAACTTCGACCCCAACAGACAGCCAGGAGAGGTGCAATATTTGATCAAATGGAAGAACTGGTCTCACATTCACAACACTTGGGAGACGGAGGAGACACTCAAACAACAGAATGTGAAGGGCATGAAGAAACTGGACAACTTTAAGAAAAAAGAGCAGGAGAAAAAGAAATGGCTCAAAGCTGCCTCACCTGAGGACGTGGAGTACTTCAACTGTCAGCAGGAGCTCATGGATGACTTGCATTCTCAATATCAACTTGTGGAGAGAATTATTGGACATTCAAATCAGAAGTCTGCCGCAGGCTATCCAGATTACCTTTGTAAATGGCAGGGGTTGCCATACTCTGAGTGCAGCTGGGAAGACGGTGCTCTTATTTCTAAAAAGTTTCAAAAATGCATTGATGAATACATGAGCCGGAACCAGTGCAAAACCATCCCCTCCAGAGACTGCAAGGTTTTAAAACAGAGGCCACGGTTTGTTCCCATGAAGAAGCAACCTCATTacattggtggagaaggtttggAGCTGCGGGACTATCAGCTGGATGGTCTGAACTGGATGGCCCATTCTTGGTGCAAAGGAAACAGTTGTATCCTGGCAGACGAGATGGGTCTGGGCAAAACCATCCAGACCATCAGTTTCCTCAATTACTTGTTCCATGAGCACCAGCTTTACGGGCCGTTCCTTCTGGTGGTGCCACTGTCCACCCTCACATCCTGGCAGAGAGAGATACAGCTCTGGGCTCCTCTGATGAATGTTGTGGTGTACCTGGGAGATATCAACAGCAGAAACATGATTCGAACACATGAATGGATGCATCCGCAGACCAAACGACTGAAGTTGAACATTCTTCTGACTACATATGAAATTCTGCTGAAGGATAAGTCATTTTTAGGAAATGTAAGCTGGGCGTTCATTGGTGTAGACGAGGCCCATCGGCTGAAGAACGATGACTCTCTGCTCTACAAGACTATGATAGAGTTCAAGTCCAATCACAGGCTCCTGATCACTGGCACACCCCTCCAGAACTCCCTCAAAGAGCTCTGGTCTCTGCTACACTTCATCATGCCTGAAAAGTTTCACTCGTGGGAGATGTTTGAAGAGGAACATGGGAAAGGCAGGGATTCGGGCTACACAAGCCTTCATAAGGAGCTGGAGCCATTCCTGCTGCGCAGAGTAAAGAAGGATGTGGAGAAATCTCTGCCTGCCAAGGTGGAACAGATCCTCCGGGTGGAGATGAGCGCGGTTCAGAAACAATACTACAAGTGGATATTGACGAGAAACTATAAAGCCCTGAGTAAAGGCACTAAAGGAAGCACGTCAGGCTTTCTCAACATCATGATGGAGTTGAAGAAATGCTGTAACCACTGCTACCTCATTAAACCGCCTGACGACAACGAGTTCTACAACAGACAAGAAGGCCTACAGCACCTTGTTCGAAGTAGTGGGAAGCTGATCCTTCTGGATAAACTGCTGGTTCGGCTGAAGGAACGAGGGCACCGTGTGCTCATCTTCTCGCAGATGGTTCGGATGCTGGACATCCTGGCTGAATATCTGAAGTACCGGCAGTTCTTATTCCAGAGACTGGATGGTTCCATAAAGGGGGAAATGAGAAAGCAGGCTTTGGATCATTTTAATGCAGACGGCTCTGAGGATTTCTGTTTCCTGTTGTCCACACGAGCGGGTGGTCTGGGCATTAACCTGGCCTCTGCAGATACAGTGGTTATTTTTGACTCAGACTGGAACCCTCAGAATGACCTGCAGGCCCAGGCCAGAGCTCACAGGATTGGTCAGAAAAAACAGGTGAATATATACCGTCTGGTGACCAAGGGCTCAGTTGAGGAGGAAATTATTGAGCGAGCCAAGAAGAAAATGGTGCTGGACCATCTCGTCATTCAGAGGATGGACACCACGGGAAAGACTGTGCTTCATACGGGTGCTGCTCCTTCCAGTTCTACTCCATTCAACAAGGAGGAACTGTCAGCTATATTGAAGTTTGGTGCTGAAGAACTTTTCAAAGAGCCAGAAGGAGAGGAACAGGAACCTCAGGAGATGGATATCGATGAAATCCTGAAGAGAGCAGAAACCAGAGAGAATGACCCAGGACCATCGACTGTAGGAGAAGAGCTGCTCTCACAGTTTAAGGTGGCAAATTTCTCCATGATGGAAGATGAGGAAATTGACATGGACACAGAGAGGAATGACAGGAACTGGGATGACATTATCCCAGAGGATCATCGGAGGAGACTCGAAGAGGAGGAGCGACAGAAAGAGCTCGCAGAAATCTATTTACTGCCCCGAATGAGGAAATGCGCTAAACAGATGAACTTTAATGGAAATGAGGGCCGACGCAGCAGGAACAGACGATACTCTGCTTCAGACAGTGATTCAGTCTCTGACCGAAAGAGGCCCAAGAAGCGTGGAAGACCTCGAACTATCCCAAGAGAGAACATTAAAGGCTTCACTGATGCTGAGATACGAAGATTTATCAAGAGTTACAAAAAGTTTGGTGGCCCTTTAGAGAGACTTGATGCCATCGCTCGTGATGCAGAGTTGGTGGATAAATCGGAGCATGATCTGCGGCGGCTGGCTGAGACCGTACACAACGGCTGTTTAAGAACGCTAAAGGAGAACCCTTGTGGACCTGAGCGAACCTCAGGCAGGCGAGGGAAGGTGAAAGGACCCACTTTCAGGATCTCAGGCGTTCAAGTCAATGCTAAGCTGGTGATCTCTCATGAGGAGGAGCTGGCTCCATTACATAAGGCCATTCCTGCTGACCCCGAGGAAAGGAAGAGgTATATAATCCCATGCCACTCAAAGGCAGCTCATTTTGACATTGAGTGGGGTAAAGAGGATGACTCCAGCCTGCTTATTGGCATTTATGAGTATGGGTATGGCAGCTGGGAGATGATCAAGATGGACCCGGACCTCAACCTCACACATAAGCTCCTTCCTGATGATCCTGACAAGAAGCCACAGGCCAAACAGCTGCAGACTCGAGCTGACTACCTCATCAAATTACTCAGCAAAGACCTCGCCAAGAAAGAAGCACAGAAACAGGCTGGCACTGCAAAATCACGCAACCGGAAACCACGGGGCAAAAAGAACAAAGCTGTAAAACCGAAGATGGAGGATGTGACGAACAGCCTGTCCTCTGCGCCGCCTTCAGATAAGAGCTCTGATGAAGAGGATGAGAAGGATGAAGAGGACAAGGTTGAGGGACGGGACAGCAAAGAGAGGGAAAAGGCCGATACCCCTGTTCACACGCCCACAGGAGGAGACGCAATCCCACTGTCTGAGGAGTCTGAAGAACTGGACCAGAAAACCTTCAGTGTGTGTAAGGAGCGCATGAGGCCTGTGAAGGCTGCACTCAAGCAGTTAGATCGTCCGGAGAAAGGTCTGTCTGAGCGAGAGCAGCTGGAACACACGCGGCAATGCCTGATCAAAATAGGAGATCACATCACCGAGTGTCTGAGAGAATACACCAACCCCGAGCAGATCAAACAGTGGAGGAAAAATCTGTGGATATTCGTTTCAAAGTTCACAGAATTCGATGCAAGGAAACTGCATAAACTGTATAAGCACGCTATTAAGAAACGACAAGAAAATGCTCAGgcAGCAGAGCAGAACACTAGCACTGTAAATACACAAAGCTTTAAACATGCAGATGTTGAGCGGCTAAAGGAGTCTCAGCAGGACGAGAGCAGCAGAGACAGTTACAGCTCTGACAGACATCATTCATCTCGCTACCACGAACACAGCAAAGAGCATCATGCCAGCGACTCCTACAGGAAGAGCTCCGACTCCAGGAAAAGGCCCTATTCCTCCTTCAGCAACGGCAAAGACCACAGAGAGCGGGAGCGAGACCAGTACAGAGAGAGAGGAGAGCGGCCGGACAGCAGATACTACAGTGAGAGCAAGCACAGGAAGCTGGACGAGCACCGCTCCAGCAGGGAGCACCGATCAGAAAGCAACTCCAAGGACAGGACTCACTCGGAGCACCGCTTCCACTCTGAGCACCGCTCCGGCAGCTCCGACTACTCGCACCACAAATCCTCCCGGGACTATCGCTACCATTCAGACTGGCAGATGGAGCACCGCTCGCCCCGGGACCAGCGCTCGCCTATCGGACACCGCTCGCCCTTCGAGTACTCGTCCGACCACAAAAGCACACCGGAACAGGTCTGGAGCGGCCGCAAGACATAA
>TCONS_00004764
tgCTCTCTTTAGGCTCAAAGCTGCCTCACCTGAGGACGTGGAGTACTTCAACTGTCAGCAGGAGCTCATGGATGACTTGCATTCTCAATATCAACTTGTGGAGAGAATTATTGGACATTCAAATCAGAAGTCTGCCGCAGGCTATCCAGATTACCTTTGTAAATGGCAGGGGTTGCCATACTCTGAGTGCAGCTGGGAAGACGGTGCTCTTATTTCTAAAAAGTTTCAAAAATGCATTGATGAATACATGAGCCGGAACCAGTGCAAAACCATCCCCTCCAGAGACTGCAAGGTTTTAAAACAGAGGCCACGGTTTGTTCCCATGAAGAAGCAACCTCATTacattggtggagaaggtttggAGCTGCGGGACTATCAGCTGGATGGTCTGAACTGGATGGCCCATTCTTGGTGCAAGTATGTCGGTTCATTTTATCCCTGAAGGCATCACAGTTTATTATCTACACTTGAATCCATTCAAACAGTCCATTTGTAGGATTGATGGGTTTAATCTTGCACATATATACAGTTCAtattgcatatgttttttattttatcagcTTGTGGTAATTTGCATGTTGTGTCTTAAAATATTAGGCAAGGTAATTTTATTTATACAGCTCATTTCatgcacaatggtaattcaaagtgctttacattaacAAGAAATATAAGAATAGAaagaaaagaaatataaaatacaacaagtataagaaatgtaaacacagtggtgtaaagtaacaaattacaaatagattaattactgtaatggagtagtttttcctcagtaattgtaatttactaagt

Function

symbol description
chd1 Predicted to enable several functions, including ATP binding activity; DNA binding activity; and DNA helicase activity. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in castration-resistant prostate carcinoma and prostate cancer. Orthologous to human CHD1 (chromodomain helicase DNA binding protein 1).

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function

KEGG:

id description
ko03021 Transcription machinery
ko03036 Chromosome and associated proteins

ZFIN:

id description
ZDB-GENE-030131-7120 Predicted to enable several functions, including ATP binding activity; DNA binding activity; and DNA helicase activity. Predicted to be located in nucleus. Human ortholog(s) of this gene implicated in castration-resistant prostate carcinoma and prostate cancer. Orthologous to human CHD1 (chromodomain helicase DNA binding protein 1).

Ensembl:

ensembl_id ENSDARG00000103787

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004762 False 6860 mRNA 0.48 37 6521376 6588793
TCONS_00004763 False 5082 mRNA 0.50 36 6522567 6587066
TCONS_00004764 True 807 lncRNA 0.38 3 6572938 6577465

Neighbor

gene id symbol gene type direction distance location
XLOC_002559 dcp2 coding downstream 27306 6473092 ~ 6494070 (-)
XLOC_002558 BX005434.1 coding downstream 48544 6472706 ~ 6472832 (-)
XLOC_002557 ca9 coding downstream 66990 6417356 ~ 6454386 (-)
XLOC_002556 NA coding downstream 111579 6389269 ~ 6409797 (-)
XLOC_002555 NA coding downstream 483630 6036881 ~ 6037746 (-)
XLOC_002561 NA coding upstream 21364 6610157 ~ 6611065 (-)
XLOC_002562 BX511100.5 coding upstream 22282 6611075 ~ 6639167 (-)
XLOC_002563 BX511100.6 coding upstream 72266 6661059 ~ 6662868 (-)
XLOC_002564 BX511100.3 coding upstream 88880 6677673 ~ 6679486 (-)
XLOC_002565 NA coding upstream 104721 6693514 ~ 6695332 (-)
XLOC_002554 CABZ01032180.1 non-coding downstream 570798 5950463 ~ 5950578 (-)
XLOC_002550 NA non-coding downstream 699792 5788620 ~ 5821584 (-)

Expression


Co-expression Network