G650765


Basic Information

Item Value
gene id G650765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 78048371 ~ 78049432 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU739570
ATGGTATTGTCATAACGTACCCCCATCAACGTGTTGACCTCCACCTTTGCATATGAATCCCTGATCACAGTCAATATCAAGGACTAGTAAATATGTATGGAACTCAGAGATGCAAAGCAGACTTCTTATTCTGCTATGCATAATGCAAAGAACGAACATCTTCCAAATAATTGATTCTCAGGAGAaagggcctcacgatccttccaTTGCCATTTTGTACCTTTTCACTAAAGGTGCATCTTCCATATTTTATAGTGAGTGGATCAATGTATCACTGAATTACCACGATATCCAGGCTCCAATAGGTGTGGAGACTGCATTACCATGACATCCAGGCTCCAATAGGTGTGGATACTGTATATAACCCAACAGACTCTAATAGGTGTGGATACTGTATATAACCCAACAGACTCTAATAGGTGTGGATACTGTATATAACCCAACAGACTCTAATAGGTGTGGATACTGTATATAACCCAACATACTCTAATAGGTGTGGATACTGTTTATAACCCAACAGACTCTAATAGGTGTGGATACTGTATAAAACCCAACGGCATTGATGGAGTTAAGATACATTGAAGCCAATCTTGCAGCACTCATATTAAGCCTACATGGCCTTGCAATTGCCTAGCAACAAAGATGTGGAACAAAGAATTTGTGAGCGAGAAGTGGATGTTTGACTCACTTATTTCTATAAGGCTACATTCGATTAGACTGAAGTTACTTCATACAACCTGTTAATGTATTTTACGTTATTTCTTGGTTCACTTCTACCTAGAATTGAATCATAGCCAAAATGTACGGCATTATCTCTTCGTATAACCCAATGGCTGGGTCATTTTAACAATGTGGTAAATGAATAATGGATACCATCCTCAAAATGATAAGCAAGACAGACCACATTTCATGGTCTCGTGGTCTGGATGTGGACCGTGGGCTGCCATTTGATTATCACCGATGTAGACTGTATTAGTTGGCTTGCAGGAGAGCTCCTCGGGcatcccgagtggtgcagtggtcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU739570 True 1025 lncRNA 0.40 2 78048371 78049432

Neighbor

gene id symbol gene type direction distance location
LOC110528541 snta1 coding downstream 100076 77874612 ~ 77948295 (-)
LOC110528539 LOC106583647 coding downstream 521008 77472703 ~ 77527363 (-)
LOC110528538 LOC106583648 coding downstream 584554 77404888 ~ 77463817 (-)
LOC110529034 LOC106583646 coding downstream 658002 77380754 ~ 77390369 (-)
LOC110528536 arfrp1 coding downstream 692910 77349078 ~ 77355461 (-)
necab3 necab3 coding upstream 26077 78075509 ~ 78130470 (-)
eya2 LOC106583664 coding upstream 206159 78209092 ~ 78312601 (-)
gcnt7 LOC106583665 coding upstream 361133 78410565 ~ 78424121 (-)
LOC110527149 NA coding upstream 520277 78569709 ~ 78572807 (-)
LOC110528552 cdh22 coding upstream 796842 78846274 ~ 79116264 (-)
G650754 NA non-coding downstream 19831 78028235 ~ 78028540 (-)
G650736 NA non-coding downstream 70171 77977925 ~ 77978200 (-)
G650729 NA non-coding downstream 81561 77966230 ~ 77966810 (-)
G650727 NA non-coding downstream 84165 77963828 ~ 77964206 (-)
G650673 NA non-coding downstream 90262 77957897 ~ 77958109 (-)
G650766 NA non-coding upstream 824 78050256 ~ 78050483 (-)
G650781 NA non-coding upstream 10011 78059443 ~ 78059651 (-)
G650784 NA non-coding upstream 10701 78060133 ~ 78060398 (-)
G650797 NA non-coding upstream 21898 78071330 ~ 78071640 (-)
G650967 NA non-coding upstream 105366 78154798 ~ 78182681 (-)
G650763 NA other downstream 1902 78043299 ~ 78046469 (-)
G650755 cbfa2t2 other downstream 18618 78029244 ~ 78029753 (-)
G649684 LOC100136508 other downstream 1031770 77009249 ~ 77016601 (-)
G649327 LOC106583642 other downstream 1827440 76214701 ~ 76220931 (-)
G652578 ncoa5 other upstream 1404643 79454075 ~ 79457103 (-)
G653015 NA other upstream 1893769 79943201 ~ 79943728 (-)
rab22a rab22a other upstream 1976528 80025960 ~ 80046659 (-)
G653274 NA other upstream 2296370 80345802 ~ 80347567 (-)

Expression


Co-expression Network