Gene
RNA
| Item | Value |
|---|---|
| gene id | G651975 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 79042764 ~ 79043248 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| gastrula zinc finger protein XlCGF52.1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU740880 | True | 485 | lncRNA | 0.47 | 1 | 79042764 | 79043248 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110527149 | NA | coding | downstream | 469957 | 78569709 ~ 78572807 (-) |
| gcnt7 | LOC106583665 | coding | downstream | 618643 | 78410565 ~ 78424121 (-) |
| eya2 | LOC106583664 | coding | downstream | 730163 | 78209092 ~ 78312601 (-) |
| necab3 | necab3 | coding | downstream | 912294 | 78075509 ~ 78130470 (-) |
| LOC110528541 | snta1 | coding | downstream | 1094469 | 77874612 ~ 77948295 (-) |
| znfx1 | LOC106583673 | coding | upstream | 218804 | 79262052 ~ 79275120 (-) |
| LOC110528554 | NA | coding | upstream | 232003 | 79275251 ~ 79277209 (-) |
| ddx27 | ddx27 | coding | upstream | 236151 | 79279399 ~ 79301866 (-) |
| snrpb | snrpb | coding | upstream | 264985 | 79308233 ~ 79311901 (-) |
| ube2c | ube2c | coding | upstream | 299034 | 79342282 ~ 79346292 (-) |
| G651959 | NA | non-coding | downstream | 20861 | 79021647 ~ 79021903 (-) |
| G651956 | NA | non-coding | downstream | 26397 | 79016155 ~ 79016367 (-) |
| G651953 | NA | non-coding | downstream | 28422 | 79014103 ~ 79014342 (-) |
| G651926 | NA | non-coding | downstream | 51433 | 78960700 ~ 78991331 (-) |
| G651918 | NA | non-coding | downstream | 92780 | 78949770 ~ 78949984 (-) |
| G652052 | NA | non-coding | upstream | 88891 | 79132139 ~ 79132338 (-) |
| G652093 | NA | non-coding | upstream | 120722 | 79163970 ~ 79164281 (-) |
| G652243 | NA | non-coding | upstream | 144091 | 79187339 ~ 79187553 (-) |
| G652266 | NA | non-coding | upstream | 178090 | 79221338 ~ 79221567 (-) |
| G652268 | LOC106604946 | non-coding | upstream | 180800 | 79224048 ~ 79224321 (-) |
| G650763 | NA | other | downstream | 996295 | 78043299 ~ 78046469 (-) |
| G650755 | cbfa2t2 | other | downstream | 1013011 | 78029244 ~ 78029753 (-) |
| LOC110529034 | LOC106583646 | other | downstream | 1659828 | 77380754 ~ 77390369 (-) |
| G649684 | LOC100136508 | other | downstream | 2026163 | 77009249 ~ 77016601 (-) |
| G652578 | ncoa5 | other | upstream | 410827 | 79454075 ~ 79457103 (-) |
| G653015 | NA | other | upstream | 899953 | 79943201 ~ 79943728 (-) |
| rab22a | rab22a | other | upstream | 982712 | 80025960 ~ 80046659 (-) |
| G653274 | NA | other | upstream | 1302554 | 80345802 ~ 80347567 (-) |
| LOC110528585 | LOC106583707 | other | upstream | 1607342 | 80650590 ~ 80723518 (-) |
