Gene
RNA
| Item | Value |
|---|---|
| gene id | G652150 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 79223034 ~ 79223267 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC105416325 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU741062 | True | 234 | lncRNA | 0.55 | 1 | 79223034 | 79223267 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965319 | NA | coding | upstream | 623920 | 78597699 ~ 78599114 (+) |
| tfap2c | LOC106583667 | coding | upstream | 753877 | 78447783 ~ 78469157 (+) |
| rtf2 | LOC106583666 | coding | upstream | 776735 | 78380975 ~ 78446299 (+) |
| LOC110528546 | LOC106583653 | coding | upstream | 973835 | 78193630 ~ 78249199 (+) |
| pxmp4 | pxmp4 | coding | upstream | 1042772 | 78178053 ~ 78180262 (+) |
| LOC110528557 | LOC106583675 | coding | downstream | 97732 | 79320999 ~ 79338163 (+) |
| zgc:109913 | LOC106583679 | coding | downstream | 115958 | 79339225 ~ 79342142 (+) |
| LOC110529039 | LOC106583677 | coding | downstream | 165831 | 79389098 ~ 79421631 (+) |
| ncoa5 | NA | coding | downstream | 221205 | 79444472 ~ 79457104 (+) |
| nat8l2 | LOC106583684 | coding | downstream | 503905 | 79727172 ~ 79729864 (+) |
| G652107 | NA | non-coding | upstream | 49951 | 79172765 ~ 79173083 (+) |
| G652087 | NA | non-coding | upstream | 61937 | 79160886 ~ 79161097 (+) |
| G652079 | NA | non-coding | upstream | 71638 | 79150991 ~ 79151396 (+) |
| G652070 | yo84 | non-coding | upstream | 79176 | 79143336 ~ 79143858 (+) |
| G652069 | NA | non-coding | upstream | 80005 | 79142655 ~ 79143029 (+) |
| G652161 | NA | non-coding | downstream | 17114 | 79240381 ~ 79240658 (+) |
| G652177 | NA | non-coding | downstream | 45227 | 79268494 ~ 79268724 (+) |
| G652195 | NA | non-coding | downstream | 101987 | 79325254 ~ 79325750 (+) |
| G652192 | ube2c | non-coding | downstream | 118982 | 79342249 ~ 79343116 (+) |
| G652215 | NA | non-coding | downstream | 152558 | 79375825 ~ 79376295 (+) |
| G651075 | NA | other | upstream | 807027 | 78359416 ~ 78416007 (+) |
| G650827 | NA | other | upstream | 1113632 | 78107406 ~ 78109402 (+) |
| G650261 | NA | other | upstream | 1389973 | 77831000 ~ 77833061 (+) |
| G650282 | NA | other | upstream | 1565782 | 77653938 ~ 77657252 (+) |
| G650094 | NA | other | upstream | 1748785 | 77473212 ~ 77474249 (+) |
| G652845 | NA | other | downstream | 767342 | 79990609 ~ 79992859 (+) |
| LOC110528584 | bloc1s1 | other | downstream | 1513609 | 80736845 ~ 80747734 (+) |
| G653803 | NA | other | downstream | 1908913 | 81132180 ~ 81133770 (+) |
| G654244 | NA | other | downstream | 1985889 | 81209156 ~ 81209544 (+) |
| G654265 | LOC106611445 | other | downstream | 2103056 | 81326323 ~ 81352422 (+) |
