G653864


Basic Information

Item Value
gene id G653864
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 80551042 ~ 80553778 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU743057
CCatacattcattataatccacataatacttcacatttcctgttgctgcaggattattttcctgctgtagcaaattgtctcaaattaagatcctacatctgtaccaccATAATCTACATCTCAGATGATGTGACCTGGGTAAAGTGTGGAGCAGCACGTACCCTTCGTGCTGCTGCAGACACCCCTTCATGGCTTTGACCTGGACAAGGTGAGACGACATGTCTGTAGCCAACACCATCTCTATCACCAGCGCTCGCAgctccctgtcacacacacagaaacacacccatGTAACCTTTCCAGACTGCCCTTTCACACACAAACGCATAAACACACCCATCTAACCTTTCCAGACTGTCCTGATGGGTTTCTCTGTTCCCATGGTAACATAGATTTGTGCTGCTCAAAGGGGAGTTGTGGTTGGGTttgcttctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtgtctctgtctctgtctgtctgtctcacagcaTATTGATACAGTACATCTCTCCTACATCCACTGTTCTCTGGAGAGGTTCATGAAGATGTTGGATTGGTCGTCCTGTAGAAGATGGAACGCGGCACTGATGTGGTGGCTTTCCTGGACTGACCGGTCGTTGTAGATCATAGCAAAGTCTgaccGAGGCACTGTACGTAGATGACCAGGCTCATatgtatagagacagcaccaGATAGTGAGATTCTGAGTGGTGGAGCTGTAATAAAGAGGtaatgagagaagagaacagatgGACATAAATGACTCAGGAGAAAGGAGCAGGAGCAAGTTAATTGAGTCACATCCATTATCAAGCCCCCTGTCGAAAGTAATTTGCATACATGTTTACTAGACACTTAgaaatggataataaacagatatCAGCGCTACACAGTAAATGGGATTCCCCGTAGGGATAAACACTGCATAGAAAACTTAGGCAAGTGCTAAAAAAAAGGAGACATTTAATTGTCAATGTTTTGGCTGTACAACACATTTTCAAGACTGCAGCAACAGCTTAGTACGTGTTTTTAGGATTAATCTGCTTCCATTTGCAAGCAGAACAAAACAGAGCATATATGTAGTACTGTTGTAACAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU743057 True 1143 lncRNA 0.44 2 80551042 80553778

Neighbor

gene id symbol gene type direction distance location
LOC110529043 LOC106583712 coding downstream 198036 80261240 ~ 80353006 (-)
LOC110528575 LOC106583691 coding downstream 383763 80152879 ~ 80167279 (-)
LOC110528574 LOC106583691 coding downstream 422852 80111773 ~ 80128190 (-)
rab22a rab22a coding downstream 504383 80025960 ~ 80046659 (-)
LOC110528568 LOC106583688 coding downstream 525855 79990599 ~ 80025187 (-)
LOC110528589 LOC106583709 coding upstream 4786 80558564 ~ 80612786 (-)
LOC110528585 LOC106583707 coding upstream 101795 80650590 ~ 80723518 (-)
LOC110528602 NA coding upstream 745129 81298907 ~ 81299848 (-)
LOC110528600 LOC106566189 coding upstream 747758 81301536 ~ 81313006 (-)
tma7 NA coding upstream 797432 81351210 ~ 81353282 (-)
G653846 NA non-coding downstream 24717 80525888 ~ 80526325 (-)
G653419 NA non-coding downstream 82134 80468368 ~ 80468908 (-)
G653358 NA non-coding downstream 136700 80414045 ~ 80414342 (-)
G653351 NA non-coding downstream 144891 80405939 ~ 80406151 (-)
G653343 NA non-coding downstream 163371 80387458 ~ 80387671 (-)
G653909 NA non-coding upstream 91009 80644787 ~ 80645060 (-)
G653950 NA non-coding upstream 191347 80745125 ~ 80747556 (-)
G653977 NA non-coding upstream 224982 80778760 ~ 80780691 (-)
G653985 NA non-coding upstream 243396 80797174 ~ 80797725 (-)
G653274 NA other downstream 203475 80345802 ~ 80347567 (-)
G653015 NA other downstream 607314 79943201 ~ 79943728 (-)
G652578 ncoa5 other downstream 1095654 79454075 ~ 79457103 (-)
eya2 LOC106583664 other downstream 2238540 78209092 ~ 78312601 (-)
G655289 NA other upstream 961759 81515537 ~ 81516722 (-)
G655297 NA other upstream 982779 81536557 ~ 81537098 (-)
G655316 slc6a6 other upstream 1068625 81622403 ~ 81651265 (-)

Expression


Co-expression Network