G653977


Basic Information

Item Value
gene id G653977
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 80778760 ~ 80780691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU743206
CACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACTGACTACCCTACTGACTACCCTACTCACTACACTACTGACTAGCCTACTGACTACCCTACTGACTACCCTACTGTACATGTAACTACTATCTACCTTACGTGCCAGAtaggctgtgcgtgtgtgtgtgtttagagctGCATGTTTCAACGGGACAAAGCCAAACCTACGTCAGCCTCGGGTCAAAGATTGACAGATGCCCTGGATCTTGGTTTGTTGTGTTTATTTGCTTGTCAAACACTGAGTGGATTTAGCAAATAATGACAGTGACAAATATCACTGATGCATCATTGAGAGTGGATGTTTTAAGGGAATATTTAAAGTCTGACCGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACCTTGATAAGAGAGCTAATCACAATGGCTCCAGCATTCACCATGGGGTTGTGGGGTTTGTCTAGGCACACAAAACACGAGTTGGTTATTATCAGAGTTAAGACAGAATACAGTATGGTCACAGAAGTAGAATGATGCTTTACTATTTGGAGACTAAGTCTTTCTTCGAGAGCTGACATCACATCCACTTGGTAGAAAGTAGTAGATCCTATCAACCTGAACTCACGTGGTCTTAACTTGTACtgaaatcaaatcatatttgtcCAGCAAACTAACAAAACACCTGCAAGACAATAATGTACAGCAACAGGAGCAAGGGTTCCCTTACCCACCTTCCTCATCCAGGTAGAGCTTGTTGAATTTCAGTCCACTGGGCTCCATCCCCACATAGCGGTGTACCTTCTCTGTCCCAGCCTCGTGGATGGCCACAGCATATTCCAGTGGCTTCACACACGACTGGAGACAGAAGGGCTGCTTAGTGTCCCCTACTGAGTGTCTGGGGTGAgagcagggagagacagagggtgggaaaAGGCCATTAGTAAAGAGGAAATaaaggaagaaaggagagagaggaccagagaaacagaggaacagagaaacagaggaagaaaggagagagaggaccagagaaacagaggaagaaaggagagaggaccagagaaacagaggaagaaaggagagaggaccagagaaacagaggaagaaaggagagagacagagagagaggaccagaggaagaaagagagaggaccagaggacgaaagagagagaggaccagaggaaaaggtgtcagtagtatgAGTCACTATTTCACATTCAGTTATCAATCATCCAGATATATAAACACACAGGGAGGTTGTACCCACCTCTGTCCGTCCACTGTACACAGGGAGGTTGTACCCACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGACACACCCCAGAGATCAGG
>TU743208
CACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACTGACTACCCTACTGACTACCCTACTCACTACACTACTGACTAGCCTACTGACTACCCTACTGACTACCCTACTGTACATGTAACTACTATCTACCTTACGTGCCAGAtaggctgtgcgtgtgtgtgtgtttagagctGCATGTTTCAACGGGACAAAGCCAAACCTACGTCAGCCTCGGGTCAAAGATTGACAGATGCCCTGGATCTTGGTTTGTTGTGTTTATTTGCTTGTCAAACACTGAGTGGATTTAGCAAATAATGACAGTGACAAATATCACTGATGCATCATTGAGAGTGGATGTTTTAAGGGAATATTTAAAGTCTGACCGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACCTTGATAAGAGAGCTAATCACAATGGCTCCAGCATTCACCATGGGGTTGTGGGGTTTGTCTAGGCACACAAAACACGAGTTGGTTATTATCAGAGTTAAGACAGAATACAGTATGGTCACAGAAGTAGAATGATGCTTTACTATTTGGAGACTAAGTCTTTCTTCGAGAGCTGACATCACATCCACTTGGTAGAAAGTAGTAGATCCTATCAACCTGAACTCACGTGGTCTTAACTTGTACtgaaatcaaatcatatttgtcCAGCAAACTAACAAAACACCTGCAAGACAATAATGTACAGCAACAGGAGCAAGGGTTCCCTTACCCACCTTCCTCATCCAGGTAGAGCTTGTTGAATTTCAGTCCACTGGGCTCCATCCCCACATAGCGGTGTACCTTCTCTGTCCCAGCCTCGTGGATGGCCACAGCATATTCCAGTGGCTTCACACACGACTGGAGACAGAAGGGCTGCTTAGTGTCCCCTACTGAGTGTCTGGGGTGAgagcagggagagacagagggtgggaaaAGGCCATTAGTAAAGAGGAAATaaaggaagaaaggagagagaggaccagagaaacagaggaacagagaaacagaggaagaaaggagagagaggaccagagaaacagaggaagaaaggagagaggaccagagaaacagaggaagaaaggagagaggaccagagaaacagaggaagaaaggagagagacagagagagaggaccagaggaagaaagagagaggaccagaggaaaaggtgtcagtagtatgAGTCACTATTTCACATTCAGTTATCAATCATCCAGATATATAAACACACAGGGAGGTTGTACCCACCTCTGTCCGTCCACTGTACACAGGGAGGTTGTACCCACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCCACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCATCCACTGTACATAGGGAGATTGTACCCACCTCTGCCCCTCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGATTGTACCCACCTCTGCCCCTCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGACACACCCCAGAGATCAGG
>TU743209
CACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACTGACTACCCTACTGACTACCCTACTCACTACACTACTGACTAGCCTACTGACTACCCTACTGACTACCCTACTGTACATGTAACTACTATCTACCTTACGTGCCAGAtaggctgtgcgtgtgtgtgtgtttagagctGCATGTTTCAACGGGACAAAGCCAAACCTACGTCAGCCTCGGGTCAAAGATTGACAGATGCCCTGGATCTTGGTTTGTTGTGTTTATTTGCTTGTCAAACACTGAGTGGATTTAGCAAATAATGACAGTGACAAATATCACTGATGCATCATTGAGAGTGGATGTTTTAAGGGAATATTTAAAGTCTGACCGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACCTTGATAAGAGAGCTAATCACAATGGCTCCAGCATTCACCATGGGGTTGTGGGGTTTGTCTAGGCACACAAAACACGAGTTGGTTATTATCAGAGTTAAGACAGAATACAGTATGGTCACAGAAGTAGAATGATGCTTTACTATTTGGAGACTAAGTCTTTCTTCGAGAGCTGACATCACATCCACTTGGTAGAAAGTAGTAGATCCTATCAACCTGAACTCACGTGGTCTTAACTTGTACtgaaatcaaatcatatttgtcCAGCAAACTAACAAAACACCTGCAAGACAATAATGTACAGCAACAGGAGCAAGGGTTCCCTTACCCACCTTCCTCATCCAGGTAGAGCTTGTTGAATTTCAGTCCACTGGGCTCCATCCCCACATAGCGGTGTACCTTCTCTGTCCCAGCCTCGTGGATGGCCACAGCATATTCCAGTGGCTTCACACACGACTGGAGACAGAAGGGCTGCTTAGTGTCCCCTACTGAGTGTCTGGGGTGAgagcagggagagacagagggtgggaaaAGGCCATTAGTAAAGAGGAAATaaaggaagaaaggagagagaggaccagagaaacagaggaacagagaaacagaggaagaaaggagagagaggaccagagaaacagaggaagaaaggagagagacagagagagaggaccagaggaagaaagagagaggaccagaggaaaaggtgtcagtagtatgAGTCACTATTTCACATTCAGTTATCAATCATCCAGATATATAAACACACAGGGAGGTTGTACCCACCTCTGTCCGTCCACTGTACACAGGGAGGTTGTACCCACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCCACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCATCCACTGTACATAGGGAGATTGTACCCACCTCTGCCCCTCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGATTGTACCCACCTCTGCCCCTCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGACACACCCCAGAGATCAGG
>TU743210
CACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACCGACTACCCTACTGACTACACTACTGACTACCCTACTGACTACCCTACTCACTACACTACTGACTAGCCTACTGACTACCCTACTGACTACCCTACTGTACATGTAACTACTATCTACCTTACGTGCCAGAtaggctgtgcgtgtgtgtgtgtttagagctGCATGTTTCAACGGGACAAAGCCAAACCTACGTCAGCCTCGGGTCAAAGATTGACAGATGCCCTGGATCTTGGTTTGTTGTGTTTATTTGCTTGTCAAACACTGAGTGGATTTAGCAAATAATGACAGTGACAAATATCACTGATGCATCATTGAGAGTGGATGTTTTAAGGGAATATTTAAAGTCTGACCGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACAGGATACACTCACACCATGTATAGGGTGGTCTGTAGACTGTCTGTCTAGTTACCTTGATAAGAGAGCTAATCACAATGGCTCCAGCATTCACCATGGGGTTGTGGGGTTTGTCTAGGCACACAAAACACGAGTTGGTTATTATCAGAGTTAAGACAGAATACAGTATGGTCACAGAAGTAGAATGATGCTTTACTATTTGGAGACTAAGTCTTTCTTCGAGAGCTGACATCACATCCACTTGGTAGAAAGTAGTAGATCCTATCAACCTGAACTCACGTGGTCTTAACTTGTACtgaaatcaaatcatatttgtcCAGCAAACTAACAAAACACCTGCAAGACAATAATGTACAGCAACAGGAGCAAGGGTTCCCTTACCCACCTTCCTCATCCAGGTAGAGCTTGTTGAATTTCAGTCCACTGGGCTCCATCCCCACATAGCGGTGTACCTTCTCTGTCCCAGCCTCGTGGATGGCCACAGCATATTCCAGTGGCTTCACACACGACTGGAGACAGAAGGGCTGCTTAGTGTCCCCTACTGAGTGTCTGGGGTGAgagcagggagagacagagggtgggaaaAGGCCATTAGTAAAGAGGAAATaaaggaagaaaggagagagaggaccagagaaacagaggaacagagaaacagaggaagaaaggagagagaggaccagagaaacagaggaagaaaggagagagacagagagagaggaccagaggaagaaagagagaggaccagaggacgaaagagagagaggaccagaggaaaaggtgtcagtagtatgAGTCACTATTTCACATTCAGTTATCAATCATCCAGATATATAAACACACAGGGAGGTTGTACCCACCTCTGTCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGCCCGTCCACTGTACACAGGGAGGTTGTACCTACCTCTGTCCATCCACTGTACACAGGGACACACCCCAGAGATCAGG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU743206 False 1742 lncRNA 0.47 2 80778760 80780691
TU743208 False 1908 TUCP 0.48 2 80778760 80780691
TU743209 False 1846 TUCP 0.48 3 80778760 80780691
TU743210 True 1642 lncRNA 0.47 3 80778760 80780691
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110528585 LOC106583707 coding downstream 55242 80650590 ~ 80723518 (-)
LOC110528589 LOC106583709 coding downstream 165974 80558564 ~ 80612786 (-)
LOC110529043 LOC106583712 coding downstream 425754 80261240 ~ 80353006 (-)
LOC110528575 LOC106583691 coding downstream 611481 80152879 ~ 80167279 (-)
LOC110528574 LOC106583691 coding downstream 650570 80111773 ~ 80128190 (-)
LOC110528602 NA coding upstream 518216 81298907 ~ 81299848 (-)
LOC110528600 LOC106566189 coding upstream 520845 81301536 ~ 81313006 (-)
tma7 NA coding upstream 570519 81351210 ~ 81353282 (-)
LOC118965322 LOC106583721 coding upstream 642441 81423132 ~ 81430600 (-)
LOC110528605 grip2 coding upstream 885995 81666686 ~ 81992596 (-)
G653950 NA non-coding downstream 31204 80745125 ~ 80747556 (-)
G653909 NA non-coding downstream 133700 80644787 ~ 80645060 (-)
G653864 NA non-coding downstream 224982 80551042 ~ 80553778 (-)
G653846 NA non-coding downstream 252435 80525888 ~ 80526325 (-)
G653985 NA non-coding upstream 16483 80797174 ~ 80797725 (-)
G653990 NA non-coding upstream 19514 80800205 ~ 80800437 (-)
G653991 NA non-coding upstream 19825 80800516 ~ 80800718 (-)
G654022 NA non-coding upstream 84195 80864886 ~ 80865186 (-)
G654131 NA non-coding upstream 244838 81025529 ~ 81056989 (-)
G653274 NA other downstream 431193 80345802 ~ 80347567 (-)
rab22a rab22a other downstream 734056 80025960 ~ 80046659 (-)
G653015 NA other downstream 835032 79943201 ~ 79943728 (-)
G652578 ncoa5 other downstream 1323372 79454075 ~ 79457103 (-)
G655289 NA other upstream 734846 81515537 ~ 81516722 (-)
G655297 NA other upstream 755866 81536557 ~ 81537098 (-)
G655316 slc6a6 other upstream 841712 81622403 ~ 81651265 (-)
G655387 NA other upstream 972864 81753555 ~ 81753966 (-)
G655433 NA other upstream 1051987 81832678 ~ 81833031 (-)

Expression

G653977 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
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G653977 Expression in each Bioproject

Bar chart with 14 bars.
G653977 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 80.
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Co-expression Network