XLOC_025622 (BX649559.2)


Basic Information

Item Value
gene id XLOC_025622
gene name BX649559.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 40672242 ~ 40688451 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050462
agtttacCCActcgtaggctgcgccgtagcatacgtgtgcgcttgacccagaaACAGTACAAAAACATGCATCACAAGgatatgggtagggttagggacagatttatttacatgCAGATACTTAATCAATATCAATGCCACTGTGAGCAGAAAATAAAACCTAGatgtgataaaaGATGGGAACATCACTATCAGAAAGATATATCCTTGAAAAAATCAGTGACTACGttcacatggacGCACAAACAGAAGGAGAGTCGAGAAGGCCAAGatttcaatggctgcagTAAAGTTATTGGAAACAAtttggctagaattaaacaaaaaacatttaaggtcaacattatttgtccttttaatcctttaaatgccactttaaggaaaaaaaaattctccgtTAAACAGGAAATGAGGGGAAATAagggggctaataattctgtcttcaactgtatagcaAacaaacacaatcatttgagcatttactcagcctcgtCTTATTCCaaaccaatttctggtttgttcaattcacctgtaccgcatgtctttggactggggaaaaccggagcacccggaggaaacatacGCAAACGcgtggaGCCAAACAAGTCACAACGAACCACAACCAGAAGGGTAAAAAACACGCCCAATAGGTCAGAACTATGTCATCTGCCAGTCAATCAAGATCATGGACGGCAAGGCGAGGATAAGAGAGAAGATTATGCCCACCAAACACATATCCAGATGGAGTGGTGGTTTCACCACAGCTTCACGTTTGTGGCGCAGTGGCACTGCCCACATCTCACgAGAAATATGAATGCAGTCTTATGTGTTAAGACTGggaatattgagatttatagtttTCTCTTGACCTCTGTGTTTGGTGTAGtttatttttttgatcagAATAGCAagtatttattctttataataatcaggggtcaccacagcgcaatgaaccatcAAAGTCCGGATCCTCATAAATATCTTAGAGCACAAATGTCAGCACATCTCTCAGAAAACTCTGTTAAAATCAGTGCTGACACTGAAAGGGACATTTCCTCTGCTCTACAAACAATGCGGAcaagaaggtcgctggttccagcctcggcaggacatgcgctaattggAATAACAAAGGAAGAAGGGCTGGACTCTTCTACTCTGGAGTTGCCTAGGTTGAGAGGTGGTGGGCTGAGGAGGAACATTGCGGTTTTCTTCTGTGGCAAACAGGGTTTGTCATATggtggaatgGCGCATACTGatCTGCACTTAATGTGCAACTTAATGTTATTTCCTTTTTGTGAAAGGTTTAACAGAAAAGTGCGTAATTCATATGCATTGTCTGTATCGTCATTTTCCTCTGCCAAACCCAAGCTACTGTCTTATTACTGCACCTCTGTCAGGAAACTGCCAGGTAGGGAAGAACTCCAAGGACATTACAGAAATCCAAAAGTAATTATAagcttttattataattattACAACGCCCCAACCCAACTCAATCACTCGCACATTTCAGACCGTCTTTTTACAGTCGTTCTCTGGGTCTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000109826

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050462 True 1551 mRNA 0.42 51 40672242 40688451

Neighbor

gene id symbol gene type direction distance location
XLOC_025621 fscn1a coding upstream 82753 40576447 ~ 40589489 (+)
XLOC_025620 tnrc18 coding upstream 183396 40407352 ~ 40488846 (+)
XLOC_025619 NA coding upstream 267303 40404169 ~ 40404939 (+)
XLOC_025618 NA coding upstream 319834 40351673 ~ 40352408 (+)
XLOC_025617 slc29a4 coding upstream 322509 40315410 ~ 40349733 (+)
XLOC_025623 BX649559.1 coding downstream 103269 40791720 ~ 40794879 (+)
XLOC_025624 arpc1a coding downstream 107659 40796110 ~ 40804455 (+)
XLOC_025625 arpc1b coding downstream 120560 40809011 ~ 40820612 (+)
XLOC_025626 mmd2a coding downstream 153446 40841897 ~ 40871366 (+)
XLOC_025627 NA coding downstream 210173 40898624 ~ 40902157 (+)
XLOC_025429 BX649540.1 misc upstream 10423206 30248739 ~ 30249036 (+)
XLOC_025609 BX649356.1 non-coding upstream 787286 39884819 ~ 39884956 (+)
XLOC_025606 NA non-coding upstream 1040028 39626833 ~ 39632214 (+)
XLOC_025605 NA non-coding upstream 1048317 39618568 ~ 39623925 (+)
XLOC_025628 NA non-coding downstream 256589 40945040 ~ 40948999 (+)
XLOC_025629 NA non-coding downstream 354572 41043023 ~ 41066414 (+)
XLOC_025630 BX537310.1 non-coding downstream 811958 41500409 ~ 41500525 (+)

Expression


Co-expression Network