G654673


Basic Information

Item Value
gene id G654673
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 81744527 ~ 81808727 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU744075
gcacacacacacgcacacacaaatCATGTTCAGATTTCATAAAATGAGGTGTATAATATCATTGAATATATGCTGTAAatcaatttacatttttacatgATTTGTATATATTATACAGTTTGTCTGCTACTTGTGCTTTCATCATGCTGAACATAAACAATGTGTACTTCCTGCTTATTCAGTATATAATTGAACCTCGATTAAAGACATTTCCTTGTTGAATAC
>TU744047
cacgcacgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacgcacgcacacacaaatCATGTTCAGATTTCATAAAATGAGGTGTATAATATCATTGAATATATGCTGTAAatcaatttacatttttacatgATTTGTATATATTATACAGTTTGTCTGCTACTTGTGCTTTCATCATGCTGAACATAAACAATGTGTACTTCCTGCTTATTCAGTATATAATTGAACCTCGATTAAAGACATTTCCTTGTTGAATAC
>TU744059
gtgtgttccGGTTGATGAATGCTCAAGTCAgagttgacctctctctctcttctatcttgATGTGCTTGCTTGCTTGCCTGTCTCATACCCTCATGGAAtactttcacaaaaaaaaaaGAAACATTTCAGTAAATGAGGGTGGATCTGCTGGctctgttatggtgtggggtgcattttcctggcatggtttaggtcCACTCAACCACTTAGAGGGAACGGTAAACACCAATAAATACACAGCCATTCTGAGTGACCGCCTTCAACCTATGGTGAATCAGATCTATCCTGATGGGAGTGGTCTCTTCCAGgatgacaacccccccccccccccccccccccccatccattagggaacgagtggtcactgaatggtttgatgagcaggaaaatgatgtaaaccatatgccatggccgtctcagtcaccagatctcaacccaattgaacacttatgggagattctagaGCGGCACCTGAGACAACATTTTCCACAGTTCTCCTGAAAGAATGGTGCTCGcatccaatagagttccagacaaaTCTATACCGAGgctcattgaagctgttctggcggctgGTGGAGAGGAGAGCCTAACGTCCTATTTACACAATtgatgttttctttattttggaaGTTAACAGTATGTTGATAATAGTCTGAATATTGCTGATATATTCTGGTAGAACGCTACTTTGAATTACATTTCTGAATGAAaggcacacacgcaggcacacacaaatCATGTTCAGATTTCATAAAATGAGGTGTATAATATCATTGAATATATGCTGTAAatcaatttacatttttacatgATTTGTATATATTATACAGTTTGTCTGCTACTTGTGCTTTCATCATGCTGAACATAAACAATGTGTACTTCCTGCTTATTCAGTATATAATTGAACCTCGATTAAAGACATTTCCTTGTTGAATAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU744075 False 225 lncRNA 0.31 2 81744527 81808727
TU744047 False 356 lncRNA 0.38 2 81762685 81808727
TU744059 True 940 TUCP 0.42 2 81767225 81808727

Neighbor

gene id symbol gene type direction distance location
LOC110528591 slc6a6 coding upstream 91586 81606542 ~ 81652941 (+)
LOC118965323 NA coding upstream 134497 81606847 ~ 81610030 (+)
lsm3 lsm3 coding upstream 306335 81432052 ~ 81438192 (+)
podxl2 LOC106583720 coding upstream 323054 81388173 ~ 81421473 (+)
LOC110528595 LOC106583719 coding upstream 364014 81360428 ~ 81380513 (+)
LOC118965324 NA coding downstream 333679 82142401 ~ 82145175 (+)
LOC110529047 LOC106583744 coding downstream 353700 82162427 ~ 82180242 (+)
LOC110529049 LOC106583745 coding downstream 389606 82198333 ~ 82329870 (+)
dock3 LOC106583746 coding downstream 545673 82354400 ~ 82764765 (+)
LOC110525202 LOC106583751 coding downstream 965050 82773777 ~ 82778043 (+)
G654671 NA non-coding upstream 2740 81741489 ~ 81741787 (+)
G654653 NA non-coding upstream 23871 81719370 ~ 81720656 (+)
G654633 NA non-coding upstream 53950 81689994 ~ 81690577 (+)
G654621 grip2 non-coding upstream 75467 81666717 ~ 81669060 (+)
G654586 NA non-coding upstream 77987 81581028 ~ 81666540 (+)
G654718 NA non-coding downstream 30199 81838926 ~ 81839232 (+)
G654722 NA non-coding downstream 34928 81843655 ~ 81843901 (+)
G654726 NA non-coding downstream 47499 81856226 ~ 81856447 (+)
G654729 NA non-coding downstream 53156 81861883 ~ 81871527 (+)
G654743 NA non-coding downstream 88370 81897097 ~ 81897324 (+)
G654603 NA other upstream 169104 81574942 ~ 81575423 (+)
G654265 LOC106611445 other upstream 393327 81326323 ~ 81352422 (+)
G654244 NA other upstream 534983 81209156 ~ 81209544 (+)
G653803 NA other upstream 610757 81132180 ~ 81133770 (+)
LOC110528584 bloc1s1 other upstream 996793 80736845 ~ 80747734 (+)
G654782 NA other downstream 142275 81951002 ~ 81951392 (+)
G655042 NA other downstream 650358 82459085 ~ 82459667 (+)
G656125 NA other downstream 1347287 83156014 ~ 83156319 (+)
G656264 NA other downstream 1458421 83267148 ~ 83272209 (+)
G656551 NA other downstream 1750110 83558837 ~ 83560518 (+)

Expression


Co-expression Network