Gene
RNA
| Item | Value |
|---|---|
| gene id | G654774 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 81941368 ~ 81941586 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU744228 | True | 219 | lncRNA | 0.39 | 1 | 81941368 | 81941586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110528604 | LOC106583724 | coding | upstream | 133468 | 81794468 ~ 81807900 (+) |
| LOC110528591 | slc6a6 | coding | upstream | 288427 | 81606542 ~ 81652941 (+) |
| LOC118965323 | NA | coding | upstream | 331338 | 81606847 ~ 81610030 (+) |
| lsm3 | lsm3 | coding | upstream | 503176 | 81432052 ~ 81438192 (+) |
| podxl2 | LOC106583720 | coding | upstream | 519895 | 81388173 ~ 81421473 (+) |
| LOC118965324 | NA | coding | downstream | 200820 | 82142401 ~ 82145175 (+) |
| LOC110529047 | LOC106583744 | coding | downstream | 220841 | 82162427 ~ 82180242 (+) |
| LOC110529049 | LOC106583745 | coding | downstream | 256747 | 82198333 ~ 82329870 (+) |
| dock3 | LOC106583746 | coding | downstream | 412814 | 82354400 ~ 82764765 (+) |
| LOC110525202 | LOC106583751 | coding | downstream | 832191 | 82773777 ~ 82778043 (+) |
| G654765 | NA | non-coding | upstream | 8820 | 81932324 ~ 81932548 (+) |
| G654764 | NA | non-coding | upstream | 9120 | 81931804 ~ 81932248 (+) |
| G654751 | NA | non-coding | upstream | 28811 | 81911920 ~ 81912557 (+) |
| G654750 | NA | non-coding | upstream | 31119 | 81909612 ~ 81910249 (+) |
| G654743 | NA | non-coding | upstream | 44044 | 81897097 ~ 81897324 (+) |
| G654775 | NA | non-coding | downstream | 1837 | 81943423 ~ 81943681 (+) |
| G654785 | NA | non-coding | downstream | 12496 | 81954082 ~ 81954282 (+) |
| G654786 | NA | non-coding | downstream | 13952 | 81955538 ~ 81955769 (+) |
| G654790 | NA | non-coding | downstream | 20799 | 81962385 ~ 81962667 (+) |
| G654791 | NA | non-coding | downstream | 22235 | 81963821 ~ 81964159 (+) |
| G654673 | NA | other | upstream | 132641 | 81744527 ~ 81808727 (+) |
| G654603 | NA | other | upstream | 365945 | 81574942 ~ 81575423 (+) |
| G654265 | LOC106611445 | other | upstream | 590168 | 81326323 ~ 81352422 (+) |
| G654244 | NA | other | upstream | 731824 | 81209156 ~ 81209544 (+) |
| G653803 | NA | other | upstream | 807598 | 81132180 ~ 81133770 (+) |
| G654782 | NA | other | downstream | 9416 | 81951002 ~ 81951392 (+) |
| G655042 | NA | other | downstream | 517499 | 82459085 ~ 82459667 (+) |
| G656125 | NA | other | downstream | 1214428 | 83156014 ~ 83156319 (+) |
| G656264 | NA | other | downstream | 1325562 | 83267148 ~ 83272209 (+) |
| G656551 | NA | other | downstream | 1617251 | 83558837 ~ 83560518 (+) |
