G655502


Basic Information

Item Value
gene id G655502
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 81957193 ~ 81958150 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU745087
AATTTGAATAATCTGAACCATGAGGAGAAATGGAAATGTGTATTTATATTTTGTGACCAACTTTTTAATATTTCTTTGATGTTTTTTGTGAGGGGTTCAGATCACATACAGGCACAAATTGTCACGTTCGCTatcttcaaactccctgtcatagatgagccaaggcgcagcgtgcatgtaATTCCACATCTTTAATAAAGTGAAACCTTCACAAAAATACAGGTAAACAGAAACCGAACGTGACGCAGCCGTGgcgcacacaaacgcacacagaaaataaataattacccactGCATTAGGTGtcaaaaaggctgcctaagtatgattcccaatcagagaaatcgatagacagctgcctctgattgggaaccacactcggccaaaaacaaagaaatagaaaacatagaatgcccacccaaatcacgccctgacctaacggctctctaaggtcagggcgtgacaaaaataTTCAAAAAGTACATAAATAAAGAAATgaaaaacagtatattaaaaaaataaaaaaaaacattatttgtcctgtttatgttaattattggtcaattaccatgagaatAGCAGTAATTTGCATGACAATTGCCGCCTGACAAAATTGTATTATCGACACAGCCCGAAATAGGACATTTAAATGATTAGAACATAGAAGTATGTCACGTTGTGTATgtcggtggcagggaagtcaggcgcaggagaatcaaacttgGTTTAAATGCAGTAttttaataacttaaaacacaaactccaaaaccaaagtccatagtaaaataaatgtgggtacaagaacccgtcgcacaccaatcCATTAAACACGAACatgacaataaacaatctctgacaaaaaCACGAGGGGAAACAgacggttaaatacacaacaattaatgaatgggattggaaccaggtgtgtaagaagacaagacaaaaccaatggaaaatgaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU745087 True 958 lncRNA 0.37 1 81957193 81958150

Neighbor

gene id symbol gene type direction distance location
LOC118965322 LOC106583721 coding downstream 526593 81423132 ~ 81430600 (-)
tma7 NA coding downstream 603911 81351210 ~ 81353282 (-)
LOC110528600 LOC106566189 coding downstream 644187 81301536 ~ 81313006 (-)
LOC110528602 NA coding downstream 657450 81298907 ~ 81299848 (-)
LOC110528585 LOC106583707 coding downstream 1233675 80650590 ~ 80723518 (-)
sec13 sec13 coding upstream 163188 82121338 ~ 82132214 (-)
LOC110528607 LOC106566201 coding upstream 187118 82145268 ~ 82152444 (-)
LOC118965368 NA coding upstream 901231 82859381 ~ 82860786 (-)
LOC110525201 LOC106583753 coding upstream 914559 82872709 ~ 83038973 (-)
LOC118965369 NA coding upstream 1097851 83056001 ~ 83056432 (-)
G655501 NA non-coding downstream 1164 81955788 ~ 81956029 (-)
G655497 LOC100136012 non-coding downstream 6559 81950043 ~ 81950634 (-)
G655496 NA non-coding downstream 7926 81949023 ~ 81949267 (-)
G655495 NA non-coding downstream 9028 81947372 ~ 81948165 (-)
G655481 NA non-coding downstream 23951 81932927 ~ 81933242 (-)
G655509 NA non-coding upstream 9965 81968115 ~ 81968394 (-)
G655511 NA non-coding upstream 11147 81969297 ~ 81969565 (-)
G655514 NA non-coding upstream 13432 81971582 ~ 81971984 (-)
G655515 NA non-coding upstream 15588 81973738 ~ 81973954 (-)
G655518 NA non-coding upstream 19630 81977780 ~ 81978165 (-)
G655469 NA other downstream 41683 81914708 ~ 81915510 (-)
G655447 NA other downstream 85676 81859371 ~ 81871517 (-)
G655433 NA other downstream 124162 81832678 ~ 81833031 (-)
G655387 NA other downstream 203227 81753555 ~ 81753966 (-)
G655316 slc6a6 other downstream 305928 81622403 ~ 81651265 (-)
G655651 NA other upstream 267802 82225952 ~ 82226545 (-)
G655715 LOC106583745 other upstream 370248 82328398 ~ 82333651 (-)
G656314 NA other upstream 1369329 83327479 ~ 83328180 (-)
G656671 dag1 other upstream 1650382 83608532 ~ 83615998 (-)
LOC110528632 LOC105007334 other upstream 1996097 83954195 ~ 84332909 (-)

Expression


Co-expression Network