G656671 (dag1)


Basic Information

Item Value
gene id G656671
gene name dag1
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 83608532 ~ 83615998 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU746415
TCTAGTGTCATAAACAATACAATGCTATTAAaacacagaataatacaaaaattattttttttaaccatgcATTCTTTACTCAAGTATTCATACGTATGAACGACCCTCTTTTCTAGGTTGTAAGTTCCCTGCGGTCAAGGACAATGGTCAGGTTTTCTGACTCTCTTTGCATTTCAtctctgtgtatttatttattacttatctctccattttctctccttccctcttgttTTTAAGCATGTTAATTGAATGTGTGTCTGATTATATGCCAACTTGTTTTTAAGTCAAACCCATTGCTTTTCACTGCGCTGTAGTTTGGCAACCATGTTGTTTAGCGAACCAGAGACATCCCTTACTGGTATTAGGAAGGTGGTGGGAAAACAAGTATTTCATTAACAAAATTACATAAAAATGAAGGACAAAACACAGTAGAGAAGTTCCCCCTGAAACCATTATGATAAACatattattattgtcattattataatCATCATCAATACTATTACtaattattattaccattatCATTCCAGTTGTAAGGACTCATTTACTCATGAATGTAAAAACGAAATCAAGACTACATATTCTCTTTAGCGAACAAGAAAATATAGTACAATCGGCCCCTCGGAGCATAGGAAGCTTTCAGTCAGTGCTGTGTATGAAGAAGAAATGCATTTAAggctgatttgatttgacacgcCAATCCCTCAATTTCCAATTGGCAGAAATGGAAGCTGACAAAAGTAGAATACAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAATGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAATGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAAAGTAGAATCCAAAATGGAAGCCGATGAACAAAACAATGGTATAATACAGATGACATCATTCCTTTCTATGGTCCAAGAACCGTACCTAAACCAAAAGGCAGCTAATCTGTAATCGTTATCGAACCTAATTGGTTGGAGTGTACTCCTCCCTCGGCTTAAACAAAACGTGTCCCTCGGGACAGCTATCGTGTTCTAATTTAGAAGAACAACGTGTTTTTGTTGAATCCATATCCTTTGCAATACTGTTGCTAACATCTGAAATGTAACTGAAATACTGAAATGTAACCGACAGCTTAAAGATATTCTGTCAACAAGGCATTTGAACAAGTTGTAGTGAATGACTGCTAAATTTCCCCTTTTTACATCTTTGGTTGTTTTCTCCGTTAAGCTTTCACATAAATCAGGCCATCATATCCTCTTAATTGTGGAATCAAATGGCGATGTACGCTTAATTGTGTTACGGATATGTCATTTAAGATTTCACTCAGTATAACTAAAACCTGATTCTTTGCTAGTCTAGTGACTTTAATGCTGAAGGactacgccacacacacacagatatacattatatatatatatatatatatatatataaacaaacaaacaaacaaacaaaggccCGAAAGAAAATGTCCTTGTGGTGTCTACATATCTATGAATCTCAATCCAAAATCTGCATCAGTGTCTGTAACTGTCATCAGAAACTACGCCTTTCTGTCTTTTAGTAACTACCAACTCCAATTGGGACCTACCAATATAAACCTACCAGTTTTCCTTCTAAAATCAAACAGCAGAAGTGACTAGATGATGTGTGGAGACGCAGAGGAGGTGTCAGCAAGTTATTTACATATTAACCCAATAAGATACTGTATCTGTATTTTCATGGTGCTGATGGAAAGGAGATTTACAACATGGTTCCAGATGAAATGTTTATCAGGTCAGATTAATAAAACCAGTTTAGTCGACTATCATCCAGCTGTAGTGACAGGAGTCATTGTCTCAAAGGGCTGACAGTCAGACCTGACAGATGGACCCCATAGAGATGGTTAGAGAactcatcatggatataaccAATTTTTTTGCATGAAAATTGTGCTATCATAGATGCCGTAATtggacagatacaaagatgagtcctctaactAACTCTATGATGGATGCACATTTTTACGGAAACCTCTGTTGACATTGACATGTAGACTCATCAAGGGGTAAGTGAAAGCATTAGAAAACCGATTATAaccgaagctcatcactaaaaaTAAAGCTATATATTATAAGGTATGGCAGCAGCAGTGTGCCAGTGTAACACATCATGATCCCCTCCGATAATTGTACAGAGGACTAGAATTTCAAACGTGTGAAGAAGGATGAATTGTCTGGACATACTGTAGATAGACGGAGACTGGGTTTCATGATAAATGCACACTAAAAAAGCAACACTTGGTATCTTGCAAAAAGCAAACTACATATGGATACATCATCATCCTCATTTTGGGGGGGAGGAACATCATCATTATGCGTgtacatcatcatcattatgcGTGTACATCATCATGATTATGCGGgtacatcatcatcattatgtgggtacatcatcatcattatgcGTGTACGTCATCATTATgtgtacatcatcatcatcattatgcgTGTACATCATCATTATTTgtgtacatcatcatcatcattatgcgTGTACATCATTATGTgtgtacatcatcatcatcatcattatgcgTGTACATCATCATTATGTgtgtacatcatcatcatcattatgccTGTACATCATCATTATGTgtgtacatcatcatcatcatcattatgcgTGTACATCATCATTATGTGGGTTTTCTCATCACCACTCATTTTGGTAGTACACTCATCTAACCTGCATTGACCACTCACCTCCACCGGACATTACCTTACATTATTGCAAAGGGTCACTTTCAAAGTCAAAACTCAATGGGGAAAAACATGATAATACATTTGATAatatgtcaacaacaaaaaatcacttGAAATAGGTGACCCATGAGAAAAGGTACATATTGAAGAATCAATTATCTACGCTAAGATTGAACGAATTGCAATacactatttatttatttctctatttttttttattttttttacaatttgagGCTGTATCAAAAACTTTGTAAAAAAATTAGAGATTTTATCCACCattttgttcagtgttttctGGTGATCTTGTTCTtcagatctctcctctcctctcctctcctctcctctccatctcctctcctcgtctTAATGACCTTTGAGTTGTGAATAAAGATTGTATCCCTTTCAGGACCTTCCAAATCACTCTCAACAGCAAATTAACTGTTTCCCGCATAAACTGTGAGAACAAGAGCATCATCATCACTACATAAAAAAATAATTACTCCTTGTCTAAAATAAACTGCAGGAGGCTTTTTTTCACATCTGATTTACACAAACATTTTTTGAAGTATAAATACACTTAATATTATTTCAACAGGCCGATCGATAGCTATATACAGAAGACACATCGCATCACCATAAAGGCAACATGGCATTCAAATGGTCAATGTTATGATCATATTCGGATAAGGGAGccattttaaataataataacaataaaaaaagGGGACATTGTATTGTATTTCCCTCTTGAATGATTTTGGGTGGCTTCGGGATACCCAggcaaggtaaaaaaaaaatccttgagCTTCAAGTCAAAACTACACATCTGATAATAACTGGGCCAGGCTGTTGTAGAATCACAGTTGTCATGGTTGCCCTAcgtgctaacattagctaacggTAATGTTTGCTTGTTTAGTCCTGACTGGGCTGGGTCTACCTACTTGGTATACCGTTTCTTTCTGATCGAGGGAGAGatcctgtctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatcagaaCCATCCAGATATAGAGTGGATTTAAAAATAAAACTAATAAAACAAACAGAACGTTTTACATTTCTAATGATTTTTTTAGGCCAACTTTGTTATGATCATCTTGACTAGACATTGTGTGAATAAGGATACAAATATACAATTAGTGTTAAAAGGCAAACCTTATTGACTCGAAACACTGACCCACCGCCCGACAAGccactgtgttgtctgtctggctAGCTGCAGGGCTAGCTGCAGGGCTAGCTGTATGGTTAGCTGCAGGGCTAGCTGCAGGGTTATGTGCAGGGCTAGCTGCAGGGTTAGCTGCAGGGCTAGCTGCAGAGTTAGCTGCAGGGCTAGCTGCAGGGTTAGCTGCAGGGCTAGCTGCAGGGTTAGCTGCAGGGCTAGCTGCAGGGTTAGCTGCAGGGCTAGCTGCAGGGTTAGCTGCAGGGATAGCTGCAGGCTAGCTGCAGGGCTAGCTGCAGGGCTGGTGCAGATCCACATGATTATGATGTTTCTGTTTTTATTcatagaactctctctctctctattaaaaacatttaatgcctgcagtgtgtttgtttatTATCTTCTTGTATTATTAaagataaaataacataaaaagaGTGTTGTTAAGCAAGTCGTTTGAAGTCAGCCCCCCCGCTAAAAGTAAACTAAACAGAACCAAATAACTAAATTAAAACAAAAGCCCATTAGGTTTCaaacagagaaaaaaaaaaagcgCTGGGACCAGAGGGGCGTGTCTTCCCAAACTAGCCATTCAGCTGTAGCTAATGAGACGACAGACTGAATAGTGTCCTTTTTGTGGCTACTGTCGCCGCGGCTAACATCtagttctccctccctcccatctttcCAATAACTTCAACTCAGACTCAATCAGATCACCCCATAACCCTCCCAACCCAAAATCCAAAGTTTGTTCCCACtttgtcctcctcctcccaccccttATTTCCAAACAGATACTGGATTGAGACCGTTACAAGGCCCCCtgcttccctcctccttctctggaGGAGCCTGCTAAACCCTTAGGGTGGCACGTAAGGTGGTGGGGATCTGTAAGGGGTCATGTTCTTTGGACGAGATCCTTTACCTTCCATGGGTGCGGTGAAGGGGGGCGGGGGCTGGTAGGGGGGCGCGTTGGGGTCCTCGTCCCTCAGAGCCGTGTACTCACCCAGAAGGTCCTGGTTCAGGGGGGTAGTCTCTGGACTGGCCATGTTAGGGTACTCCGGTGGGGGAAGAGGGGGTTTCTCCTCCTGCAGGATGAGCGGCATGGAGGAGGACGGGGGCGGCTTGGAATCGTCAAGCTCGTCTGCGAAGATTATGGGCACCCCCTTCTTGATGAAGGTAGCCTGATCCTCGATGGTCAGCTTGCCCTTGCGCTTCTTGCGGTAGCAGATCATGGCGATGATGCCAGCGATCAGCAAGATGGCCGCCACCACCACGGCCGGAATCACCGTGTGGAGGTAGACGTCGTCGGTGCTCTGGCGTCCGGTGCCCAGTGCCGGCGTGACAGCTGGGGGGATAGGGATAGTGATTTCACCAGGCGGGACAAACATGTAGTTCCGGCAGGCACTCGTTCCTTTGACCTTGATGCTGATGGGTATGAAGTCCGGTTCCATGGCGGAGATGAACGTCTGGGAGGGCCTTCCCTGGGCATCAGAGATCCTCCTGGACATGGTCTGAATCTGCTCCTTGGGACAAGGGTTCTGCTGGAGGCTGTTGTTGGTCCACTCCACCACGATGGATCCCTTGGTGATGTTCCTCAGGGTGACCGTGCTGCTGTTGCGGTCACCGAACGAGTACGCCAGCTTCTTGATGAGCAGAATCTTCTTGTGGATGTCATTGGTCACCAGGCGAGGTTCTCCGTGTAAGCGGGCCTGGAACAGGACCGGGGACTTATCGTTGGATGCCCAGCGGTTCACACGGACCTCGAAGGCGTCGATCGCGTTCAGACCACCCTTATCGGTGGCCTGCATGAAGTACTCATGCTTCCCAACGTGATTTGAGTCTGGAAGACCGTATAGCAGCTGGCTTGTGCTATTAAACTGTATCCAGGAGTCATCCCCGACAACTTCGTTGTGGTTCATCCTCAAGGTCAACCTTAGTTTGTCTGTTGTACCGTCCTCCTTGTCAAAGAACGTATCGGATGGGATCTTCACTTCAAAGTATGTGCCCACGAAGGCATTGACCTGATCGATGGGGTTGCGGAGATCTGGTTTCTCGTTTCTTGGGTCAGGCACGATGGACGAAGGGGTGGTGCGCCTGGCTGGTTTGGCTGTGGTGGTCTTGGACTCCCTTGGCATCGGAGTGGTCTTCGGTCTCTTTGGTTTCTTGGTTGGCTTTCTGGTGGCAACTGTGGTGGGTGGAGGGAGTGTCGGTGTAGCTTCCACAACGGTATGCCTGGTCATAGTGGGTTCAATGGAGATGGTACTAGTGGACTCCATCACTCTGGTTGGCAGGGGTGCACCCTGAGTGGGAGTGTGGGCATATGAGTCTCTGACACGGATCGTGGGCTTCATGGGCAAGGGCACAGGTCCTCTCATGGGTGGGGCAGAGCTGTCTGTGGGGGCAGCAATGGCAGGTGACGACAGGGTGGGTACAATGCGAATAGGGGGCTCGACAACAGACGTTGGGGGAAGCACAACAAGAACCGGGGTAGGGGTATTGTTGAGCTGGCGCCTCACCCGTTTGGGGATATGAGGCTTCTTGTTGGCGATGTGCCAACCGACCACAGGGTATCCCAGCTGAGCAGACATAGTGCCTTCTTTCGCTGGCGCCTGGACGCTGCTGATGTTGGGGACATTGCTCTGGTCCAGGGAACAGCCCAGCTTCCAGGATAACAGAGCTCCGTTCTCCACCACCTTTTTGGCATTTCCCGGTCCGGCCATGAAGGCGGTCATGTCAAACAATCTGTTGTTGACCACGGGAAGTATCTTCATGTGCTGGAGCTCCACGCCAGAGAACTTCTTCATCTTGCCCAGCAGCTCCACCCTCTGTCTGGAGCTCATCTTGGTGAGGTCGGCGTCCAGAATCACCGTGAGTACCGTCACCGGTTCCTCTGTGCCGCAGACAAATGGCTTGACCTCATTGTTGGATGCTGACAGAATGGCTAGCTGGATCGGGTCCACATGTTCCTCTGGGTGCACCTCGATGGAGAAGATGTCCTGGCCGCCGTTTGATGTCGAGACGGCGATGTAGTGGACACCCTTGTCCTCCTCCAGTGGTAGACCCTGTAGGACGTTGCTCTCCCAGTCCCAgtgtagccatgctggtagcGTCTCCTTGCC

Function

symbol description
dag1 Enables laminin binding activity. Acts upstream of or within several processes, including T-tubule organization; skeletal muscle organ development; and somatic muscle development. Located in sarcolemma. Is expressed in several structures, including mesoderm; nervous system; pronephros; somite; and trunk musculature. Used to study muscular dystrophy-dystroglycanopathy. Human ortholog(s) of this gene implicated in Duchenne muscular dystrophy; autosomal recessive limb-girdle muscular dystrophy type 2D; autosomal recessive limb-girdle muscular dystrophy type 2P; congenital muscular dystrophy-dystroglycanopathy type A9; and inclusion body myositis. Orthologous to human DAG1 (dystroglycan 1).

NR:

description
dystroglycan

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU746415 True 7377 TUCP 0.44 3 83608532 83615998

Neighbor

gene id symbol gene type direction distance location
LOC118965325 NA coding downstream 48114 83559538 ~ 83560418 (-)
LOC118965369 NA coding downstream 552100 83056001 ~ 83056432 (-)
LOC110525201 LOC106583753 coding downstream 569559 82872709 ~ 83038973 (-)
LOC118965368 NA coding downstream 747746 82859381 ~ 82860786 (-)
LOC110528607 LOC106566201 coding downstream 1456088 82145268 ~ 82152444 (-)
LOC110528625 LOC106583755 coding upstream 115187 83731185 ~ 83735497 (-)
stl3 stl3 coding upstream 272446 83888444 ~ 83905266 (-)
LOC110528630 stl3 coding upstream 297873 83913871 ~ 83917114 (-)
LOC110528632 LOC105007334 coding upstream 338197 83954195 ~ 84332909 (-)
LOC110529055 rnf123 coding upstream 1228333 84844331 ~ 85106696 (-)
G656661 NA non-coding downstream 61800 83546530 ~ 83546732 (-)
G656655 NA non-coding downstream 70300 83537970 ~ 83538232 (-)
G656479 NA non-coding downstream 104240 83449028 ~ 83504292 (-)
G656502 NA non-coding downstream 114680 83493521 ~ 83493852 (-)
G656437 NA non-coding downstream 161102 83447153 ~ 83447430 (-)
G656707 NA non-coding upstream 25893 83641891 ~ 83696614 (-)
G656719 NA non-coding upstream 44366 83660364 ~ 83662367 (-)
G656793 NA non-coding upstream 145278 83761276 ~ 83763112 (-)
G656802 NA non-coding upstream 167561 83783559 ~ 83783830 (-)
G656806 NA non-coding upstream 170933 83786931 ~ 83788200 (-)
G656314 NA other downstream 280352 83327479 ~ 83328180 (-)
G655715 LOC106583745 other downstream 1275234 82328398 ~ 82333651 (-)
G655651 NA other downstream 1381987 82225952 ~ 82226545 (-)
G655469 NA other downstream 1693022 81914708 ~ 81915510 (-)
G655447 NA other downstream 1737015 81859371 ~ 81871517 (-)
G658255 NA other upstream 1390728 85006726 ~ 85007505 (-)
G659250 NA other upstream 2544244 86160242 ~ 86160923 (-)
G659543 NA other upstream 3016409 86632407 ~ 86633856 (-)
G659824 NA other upstream 3387738 87003736 ~ 87007292 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020564 dag1 coding NC_007133.7 CM002906.2 33131891 ~ 33194802 (+)
bowfin (Amia calva) AMCG00016988 NA coding CM030122.1 CM030122.1 40265941 ~ 40280387 (+)
mexican tetra (Astyanax mexicanus) G186722 dag1,LOC108415278,LOC107564392,LOC107708488,LOC107678152,LOC107691879,LOC107592827 non-coding NC_035918.1 CM008321.1 1953799 ~ 1957585 (-)