G658077



Basic Information


Item Value
gene id G658077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 84601607 ~ 84602202 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU748079
TAATTGAGTAGTGACCTTGGGCAGGTAATTAAGTAGTGAACTTGGGCAGTTAATTAAGTAGTGAACTAGGGCAGGTAATTGAGTAGTGAACTAGGGCAGGTAATTGAGTAGTGAACTAGGGCAGGTAATTAAGTAGTGAACTAGGGCAGGTAATTAAGTAGTGAACTTGGGCAGGTAATTAAGTAGTGAACTTGGGCAGGTAATTAAGTAGTGAACTTGGGCAGGTAATTAAGTAGTGAACTAGGGCAGGTAATTAAGTAGTAAACTTGGGCAGGTAATTAAGTAGTGAACTTGGGCAGGTAATTAAGTAGTGAACTAGGGCAGGTAATTAAGTAGTGAACTTGGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU748079 True 346 lncRNA 0.40 2 84601607 84602202

Neighbor


gene id symbol gene type direction distance location
LOC110528632 LOC105007334 coding downstream 268698 83954195 ~ 84332909 (-)
LOC110528630 stl3 coding downstream 684493 83913871 ~ 83917114 (-)
stl3 stl3 coding downstream 696341 83888444 ~ 83905266 (-)
LOC110528625 LOC106583755 coding downstream 866110 83731185 ~ 83735497 (-)
LOC118965325 NA coding downstream 1041189 83559538 ~ 83560418 (-)
LOC110529055 rnf123 coding upstream 242129 84844331 ~ 85106696 (-)
LOC110528641 terf2ip coding upstream 504769 85106971 ~ 85119900 (-)
LOC110528639 LOC106583772 coding upstream 539022 85141224 ~ 85169972 (-)
gmppb gmppb coding upstream 568916 85171118 ~ 85184654 (-)
LOC110529054 ip6k1 coding upstream 598957 85201159 ~ 85271192 (-)
G658036 NA non-coding downstream 82959 84513483 ~ 84518648 (-)
G657950 NA non-coding downstream 314273 84286343 ~ 84287334 (-)
G657949 NA non-coding downstream 316367 84283551 ~ 84285240 (-)
G657943 NA non-coding downstream 324689 84274985 ~ 84276918 (-)
G657938 NA non-coding downstream 335420 84265301 ~ 84266187 (-)
G658081 NA non-coding upstream 12281 84614483 ~ 84619197 (-)
G658143 NA non-coding upstream 145643 84747845 ~ 84752020 (-)
G658161 NA non-coding upstream 195086 84797288 ~ 84799006 (-)
G658162 NA non-coding upstream 239125 84841327 ~ 84843812 (-)
G658186 NA non-coding upstream 263651 84865853 ~ 84866335 (-)
G656671 dag1 other downstream 985609 83608532 ~ 83615998 (-)
G656314 NA other downstream 1273427 83327479 ~ 83328180 (-)
G655715 LOC106583745 other downstream 2268309 82328398 ~ 82333651 (-)
G655651 NA other downstream 2375062 82225952 ~ 82226545 (-)
G658255 NA other upstream 404524 85006726 ~ 85007505 (-)
G659250 NA other upstream 1558040 86160242 ~ 86160923 (-)
G659543 NA other upstream 2030205 86632407 ~ 86633856 (-)
G659824 NA other upstream 2401534 87003736 ~ 87007292 (-)
LOC110528667 cenpp other upstream 2682699 87114104 ~ 87293966 (-)

Expression



Co-expression Network