G657292


Basic Information

Item Value
gene id G657292
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 84612829 ~ 84618717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU747111
atctgttcctctgtatctgttcctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtatctgaccctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctgtatctattcctctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctctctgtatctgttcttCTGTATCTGTTcttctgtatctgttcctctgtatctgttcctatctgtatctgttcctctgtatctgttcccCTCTGTatctattcctctctgtatctgttcctctctgtatctgttcctctgtatctgttccgCTCTGTatctattcctctctgtatctgttcctctgtatctgttcctctctttatctgttcctctctgtatctgttcctctctgtatctgttcctctctatCTGTTACTCTGTATATGtacctctctgtatctgttcctctctgtatctgttcctctctgtatctgtccctctgtatctgttcctctgtatctgttcctctctgtatctatTCCTCTCTGcatctgttcctctgtatctgttcctctctgtatcttttcctctctgtatctgtccctctgtatctgttcctctgtatctgtttctatgtatctgttcctctctgtatctgttcctctgtatctgtttctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctgtatctattcctctgtatctgttcctctctgtatatGTTCCTCTGTATCggttcctctgtatctgttcctctgtatctgttcctctgtatctgtttctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtgtaTCTGTTCCACTCTGTATCTgtccctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctccgtatctgttcttctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtatatgttcctctctgtatctgttcctctgtatctgTTCCTTTCTGTGtctattcctctctgtatctattcctctctgtatctgttcctctctgtatctgttccgctgtatctgttcctctctgtatctattcctctctgtatctgttcctctctgtatctattcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctctgtatctattcctctctgtatctattcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctgtgtatctgttcctctgtgtatctgttcctctctgtatctgttcctctgtatctgttccgctgtatctgttcctctgtatctggtcctctgtatctgttcctctctgtatctgttcctctctgtgtctattcctctctgtatctattcctctctgtatctgttcctctgtatctgttcctctgtgtatctgttcctctgtatctgttccgCTGTATCTGTTCcgctgtatctgttcctctgtatctgttcctc
>TU747113
gtatctgttcttCTCTGTATCTATTCCTCTTTGTatctattcctctctgtatctgttcctctctgtatctgtccctttctgtatctgttcctctatatatgttcctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctgtatctgatcctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctatatctgttcctctgtatctgttcctccgTATCTTTTCCTTTCTGTGtctattcctctctgtatctattcctctctgtatctgttcctctctgtatctgttccgctgtatctgttcctctctgtatctattcctctctgtatctgttcctttctgtatctgttcctctatatctgtccctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctctgtttctgttcctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctctgcaTCTGtacctctctgtatctgttcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctctgtgtctattcctctctgtatctattcctctctgtatctgttcctc
>TU747115
gttcctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctctgtatctgttcctctctgtgtctattcctctctgtatctattcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctctgtatctattcctctctgtatctattcctctctgtatctgttcctctctgtatctgttcctctgtatctgttcctctgtatctgttcctctgtgtatctgttcctctgtgtatctgttcctctctgtatctgttcctctgtatctgttccgctgtatctgttcctctgtatctggtcctctgtatctgttcctctctgtatctgttcctctctgtgtctattcctctctgtatctattcctctctgtatctgttcctctgtatctgttcctctgtgtatctgttcctctgtatctgttccgCTGTATCTGTTCcgctgtatctgttcctctgtatctgttcctc

Function

NR:

description
PREDICTED: probable carboxypeptidase X1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU747111 False 1755 TUCP 0.43 5 84612829 84618717
TU747113 False 727 TUCP 0.42 2 84614663 84618035
TU747115 True 491 lncRNA 0.44 2 84618107 84618717

Neighbor

gene id symbol gene type direction distance location
LOC118965371 NA coding upstream 216588 84372197 ~ 84401519 (+)
LOC110528627 stl3 coding upstream 736521 83878342 ~ 83881586 (+)
LOC118965393 NA coding upstream 815507 83800611 ~ 83802600 (+)
nicn1 nicn1 coding upstream 835642 83759738 ~ 83782465 (+)
LOC110529053 LOC106583755 coding upstream 905904 83711361 ~ 83712203 (+)
amigo3 amigo3 coding downstream 285911 84904628 ~ 84909361 (+)
LOC110528638 NA coding downstream 675511 85294228 ~ 85297684 (+)
LOC110528636 LOC106583767 coding downstream 682837 85301554 ~ 85363683 (+)
pusl1 pusl1 coding downstream 933076 85551793 ~ 85617931 (+)
tamm41 tamm41 coding downstream 1012261 85630978 ~ 85648641 (+)
G657251 NA non-coding upstream 69984 84546177 ~ 84548123 (+)
G657240 LOC106562530 non-coding upstream 88309 84528954 ~ 84529798 (+)
G657146 NA non-coding upstream 187307 84364680 ~ 84430800 (+)
G657103 NA non-coding upstream 341289 84274571 ~ 84276818 (+)
G657077 NA non-coding upstream 381265 84236350 ~ 84236842 (+)
G657308 NA non-coding downstream 39022 84657739 ~ 84658261 (+)
G657370 NA non-coding downstream 139423 84758140 ~ 84758689 (+)
G657391 NA non-coding downstream 193966 84812683 ~ 84813091 (+)
G657399 NA non-coding downstream 222617 84841334 ~ 84845098 (+)
G657414 NA non-coding downstream 249037 84867754 ~ 84869774 (+)
G657254 NA other upstream 63334 84551996 ~ 84554773 (+)
G657228 NA other upstream 97689 84503549 ~ 84520418 (+)
G656551 NA other upstream 1057589 83558837 ~ 83560518 (+)
G656264 NA other upstream 1345898 83267148 ~ 83272209 (+)
G656125 NA other upstream 1461788 83156014 ~ 83156319 (+)
G657481 NA other downstream 387762 85006479 ~ 85007498 (+)
G658885 NA other downstream 1267875 85886592 ~ 85887121 (+)
G658887 NA other downstream 1277109 85895826 ~ 85896149 (+)
G659058 NA other downstream 1789985 86408702 ~ 86412974 (+)
G659136 NA other downstream 1902343 86521060 ~ 86521822 (+)

Expression


Co-expression Network