G658081


Basic Information

Item Value
gene id G658081
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 84614483 ~ 84619197 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU748088
gatacagaggaacagatacagaggatcatatacagaggaacagatacagagaggaacagatacagagaggaacagatacagaggatcagatacagaggaacagatacagagaggaacagatacagagaggaacagatacagagaggaacagatacagcggaacagatacagagaggaacagatacacaGAGGAatagatacagagaggaacagatacaaaGAGGAatagatacagagaggaacagatacagagaggaatagatacagagaggaacagatacaaaGAGGAatagatacagagaggaacagatacagcggaacagatacagagaggaacagatacagagaggaatagatacagagaggaatagaCACAGAAAGGAAAAGATAcggaggaacagatacagaggaacagatatagaggaacagatacagaggaacagatacagagaggaacagatacagagaggaacagatacagaggatcagatacagaggaacagatacagaggaacagatacagaggaacagatacagagaggaacagatacagagaggaacagatacagaggaacatatatagaggaacagatacagaaagggacagatacagagaggaatagacacagagaggaacagatacagagatgaacagatacagaggaacagatataGAGGTACAGATACAGAgtggaacagatacagagaggaacagatacagagaggaatagacacagagaggaacagatacagagatgaacagatacagaggaacatATATAGaggtacagatacagagaggaacagatacagagaggaacagatacagagatgaacagatacagagaggaacagatacagagaggaatagatacagagaggaatagacacagagaggaacagatacagagatgaacagatacagaggaacagatatagaggtacagatacagagaggaacagatacagagaggaacagatacagagaggaacagatacagaggaacagatacataggaacagatacagagaggaacagatacagaggaacagatacagaggaacagatatagaggaacagatacagaaaGGAACATATACAGAGAGGAATAggtacagagaggaacagatacagagaggaacagatacagagaggaatagatacagaggaacagatacagagaggaacagatacagaggaatagatacagagaggaacatatacagagaggaacagatacagaggaacagatacagagaggaacagatacagaggaacagatacagagaggaaacagatacagaggaatagatacagagaggaacatatacagagaggaacagatacagaggaacagatacgGAGAGGAACAgacacagaggaacagatacagaggaacagatacagagaggaacagatacagaggaacagatacagagaggaacagatacagagaggaacagatacataggaacagatacagagaggaacagatacagaggaacagatacagagaggaacagatacagaagtacagatacagaggaacagatacagagaggaacatatacagaggaacagatacagaggaacagatacagagaggaacagatacagaggaacagatacagaggaacagatacagaggaacagatacagagagggtcagatacagaggaacagatac
>TU748086
gatacagaggaacagatacagaggatcatatacagaggaacagatacagagaggaacagatacagagaggaacagatacagaggatcagatacagaggaacagatacagagaggaacagatacagagaggaacagatacagagaggaacagatacagcggaacagatacagagaggaacagatacacaGAGGAatagatacagagaggaacagatacaaaGAGGAatagatacagagaggaacagatacagagaggaatagatacagagaggaacagatacaaaGAGGAatagatacagagaggaacagatacagcggaacagatacagagaggaacagatacagagaggaatagatacagagaggaatagaCACAGAAAGGAAAAGATAcggaggaacagatacagaggaacagatatagaggaacagatacagaggaacagatacagagaggaacagatacagagaggaacagatacagaggatcagatacagaggaacagatacagaggaacagatacagaggaacagatacagagaggaacagatacagagaggaacagatacagaggaacatatatagaggaacagatacagaaagggacagatacagagaggaatagacacagagaggaacagatacagagatgaacagatacagaggaacagatataGAGGTACAGATACAGAgtggaacagatacagagaggaacagatacagagaggaatagacacagagaggaacagatacagagatgaacagatacagaggaacatATATAGaggtacagatacagagaggaacagatacagagaggaacagatacagagatgaacagatacagagaggaacagatacagagaggaatagatacagagaggaatagacacagagaggaacagatacagagatgaacagatacagaggaacagatatagaggtacagatacagagaggaacagatacagagaggaacagatacagagaggaacagatacagaggaacagatacataggaacagatacagagaggaacagatacagaggaacagatacagaggaacagatatagaggaacagatacagaaaGGAACATATACAGAGAGGAATAggtacagagaggaacagatacagagaggaacagatacagagaggaatagatacagaggaacagatacagagaggaacagatacagaggaatagatacagagaggaacatatacagagaggaacagatacagaggaacagatacagagaggaacagatacagaggaacagatacagagaggaaacagatacagaggaatagatacagagaggaacatatacagagaggaacagatacagaggaacagatacgGAGAGGAACAgacacagaggaacagatacagaggaacagatacagagaggaacagatacagaggaacagatacagagaggaacagatacagagaggaacagatacataggaacagatacagagaggaacagatacagaggaacagatacagagaggaacagatacagaagtacagatacagaggaacagatacagagaggaacatatacagaggaacagatacagaggaacagatacagagaggaacagatacagaggaacagatacagagaagaacagatacggaggaacagatacagagaggaacagatacagagaggaacagatacagagggacAGATACAGAGTGGAACAGAtacacagaggaacagatacagaggaacagatacagagaggaacagatacagagaaacagatacagaggaacagatacagaggaacagatacagaggaaccGATACAGAGGAACatatacagagaggaacagatacagaggaatagatacagaggaacagatacagagaggaacagatacagaggaacagatacagagaaacagatacagaggaacagatacagagaggaacagatacatagaaacagatacagaggaacagatacagagggacagatacagagaggaaaagatacagagaggaacagatacagaggaacagatgCAGAGAGGAatagatacagagaggaacagatacagaggaacagatacagagggacagatacagagaggaacagatacagagaggaacagatacagagaggtaCATATACAGAGTAACAGatagagaggaacagatacagagaggaacagatacagagaggaacagataaagagaggaacagatacagaggaacagatacagagaggaatagatACAGAGcggaacagatacagaggaacagatacagagaggaacagatacagagaggaatagatACAGAGgggaacagatacagaggaacagatacagataggaacagatacagaggaacagatacagaagAACAGATACAGaagaacagatacagagaggaacagatacagagaggaacagatacagagaggaacagatacagagaggaacagatacagaggaacagatacagaggaacagatacagagaggaacagatacagagaggaacagatacagagaggaacagatacagaggaacagatacagagaggaatagatacagaggaacagatacagagaggaacagatacagagggacagatacagagaggaacataTACAgaggacagatacagagaggaacagatgcagagaggaacagatacagaggaacagatacagagaggaacagatacagaggaacagatacagaggaacagatacagagagggacagatacagagaggaacagatac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594294, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU748088 False 1688 lncRNA 0.42 3 84614483 84619197
TU748086 True 2773 lncRNA 0.42 2 84615211 84619197

Neighbor

gene id symbol gene type direction distance location
LOC110528632 LOC105007334 coding downstream 281574 83954195 ~ 84332909 (-)
LOC110528630 stl3 coding downstream 697369 83913871 ~ 83917114 (-)
stl3 stl3 coding downstream 709217 83888444 ~ 83905266 (-)
LOC110528625 LOC106583755 coding downstream 878986 83731185 ~ 83735497 (-)
LOC118965325 NA coding downstream 1054065 83559538 ~ 83560418 (-)
LOC110529055 rnf123 coding upstream 225134 84844331 ~ 85106696 (-)
LOC110528641 terf2ip coding upstream 487774 85106971 ~ 85119900 (-)
LOC110528639 LOC106583772 coding upstream 522027 85141224 ~ 85169972 (-)
gmppb gmppb coding upstream 551921 85171118 ~ 85184654 (-)
LOC110529054 ip6k1 coding upstream 581962 85201159 ~ 85271192 (-)
G658076 NA non-coding downstream 10838 84601010 ~ 84603645 (-)
G658077 NA non-coding downstream 12281 84601607 ~ 84602202 (-)
G658036 NA non-coding downstream 95835 84513483 ~ 84518648 (-)
G657950 NA non-coding downstream 327149 84286343 ~ 84287334 (-)
G657949 NA non-coding downstream 329243 84283551 ~ 84285240 (-)
G658143 NA non-coding upstream 128648 84747845 ~ 84752020 (-)
G658161 NA non-coding upstream 178091 84797288 ~ 84799006 (-)
G658162 NA non-coding upstream 222130 84841327 ~ 84843812 (-)
G658186 NA non-coding upstream 246656 84865853 ~ 84866335 (-)
G658187 NA non-coding upstream 247566 84866763 ~ 84867184 (-)
G656671 dag1 other downstream 998485 83608532 ~ 83615998 (-)
G656314 NA other downstream 1286303 83327479 ~ 83328180 (-)
G655715 LOC106583745 other downstream 2281185 82328398 ~ 82333651 (-)
G655651 NA other downstream 2387938 82225952 ~ 82226545 (-)
G658255 NA other upstream 387529 85006726 ~ 85007505 (-)
G659250 NA other upstream 1541045 86160242 ~ 86160923 (-)
G659543 NA other upstream 2013210 86632407 ~ 86633856 (-)
G659824 NA other upstream 2384539 87003736 ~ 87007292 (-)
LOC110528667 cenpp other upstream 2665704 87114104 ~ 87293966 (-)

Expression


Co-expression Network