G658143


Basic Information

Item Value
gene id G658143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 84747845 ~ 84752020 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU748152
gaataataattaCTATCACATGAAAAATGTGAACTTCCTTTGTAACCCTATAGACTCCTCTGTGTACACTGCTACctagtatgtaaccccatacactgctctctagtatgtaaccccatacactgctctctagtatatAAACTCATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatatAAACTCATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgctctctagtatgTAACCCGATACACTGCCCTCTAGTATgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatataaccccatacactgctctctagtatgTAACCCGATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgccctctagtatgtaaccccatacactgctctctagtatatAAACTCATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatgTAACCCGATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatgTAACCCGATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctCTAGTATGTAACCCCATACACTGC
>TU748153
AGTATGTAACCCCatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctaCCTAGTATGTAACCCCatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctaCCTAGTATGTAACCCCatacactgctctctagtatataaccccatacactgctctctagtatataaccccatacactgctctctagtatataaccccatacactgctctctagtatataaccccatacactgctctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatataaccccatacactgctctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgctctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatgtaaccccatacactgctctctagtatataaccccATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatgTAACCCGATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatgtaaccccatacactgctctctagtatgTAACCCGATACACTGCCctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatgtaaccccatacactgccctctagtatgtaaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgctctctagtatataaccccatacactgccctctagtatataaccccatacactgccctCTAGTATGTAACCCCATACACTGC

Function

NR:

description
putative protein in rps4-rps11 intergenic region

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU748152 False 2583 lncRNA 0.44 2 84747845 84752020
TU748153 True 2344 lncRNA 0.44 2 84747845 84751862

Neighbor

gene id symbol gene type direction distance location
LOC110528632 LOC105007334 coding downstream 414936 83954195 ~ 84332909 (-)
LOC110528630 stl3 coding downstream 830731 83913871 ~ 83917114 (-)
stl3 stl3 coding downstream 842579 83888444 ~ 83905266 (-)
LOC110528625 LOC106583755 coding downstream 1012348 83731185 ~ 83735497 (-)
LOC118965325 NA coding downstream 1187427 83559538 ~ 83560418 (-)
LOC110529055 rnf123 coding upstream 92311 84844331 ~ 85106696 (-)
LOC110528641 terf2ip coding upstream 354951 85106971 ~ 85119900 (-)
LOC110528639 LOC106583772 coding upstream 389204 85141224 ~ 85169972 (-)
gmppb gmppb coding upstream 419098 85171118 ~ 85184654 (-)
LOC110529054 ip6k1 coding upstream 449139 85201159 ~ 85271192 (-)
G658081 NA non-coding downstream 128648 84614483 ~ 84619197 (-)
G658076 NA non-coding downstream 144200 84601010 ~ 84603645 (-)
G658077 NA non-coding downstream 145643 84601607 ~ 84602202 (-)
G658036 NA non-coding downstream 229197 84513483 ~ 84518648 (-)
G657950 NA non-coding downstream 460511 84286343 ~ 84287334 (-)
G658161 NA non-coding upstream 45268 84797288 ~ 84799006 (-)
G658162 NA non-coding upstream 89307 84841327 ~ 84843812 (-)
G658186 NA non-coding upstream 113833 84865853 ~ 84866335 (-)
G658187 NA non-coding upstream 114743 84866763 ~ 84867184 (-)
G658202 NA non-coding upstream 146545 84898565 ~ 84949853 (-)
G656671 dag1 other downstream 1131847 83608532 ~ 83615998 (-)
G656314 NA other downstream 1419665 83327479 ~ 83328180 (-)
G655715 LOC106583745 other downstream 2414547 82328398 ~ 82333651 (-)
G655651 NA other downstream 2521300 82225952 ~ 82226545 (-)
G658255 NA other upstream 254706 85006726 ~ 85007505 (-)
G659250 NA other upstream 1408222 86160242 ~ 86160923 (-)
G659543 NA other upstream 1880387 86632407 ~ 86633856 (-)
G659824 NA other upstream 2251716 87003736 ~ 87007292 (-)
LOC110528667 cenpp other upstream 2532881 87114104 ~ 87293966 (-)

Expression


Co-expression Network