Gene
RNA
| Item | Value |
|---|---|
| gene id | G658299 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 85114021 ~ 85115111 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU748363 | False | 277 | lncRNA | 0.48 | 2 | 85114021 | 85115111 |
| TU748365 | True | 609 | lncRNA | 0.47 | 2 | 85114021 | 85115063 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529055 | rnf123 | coding | downstream | 7325 | 84844331 ~ 85106696 (-) |
| LOC110528632 | LOC105007334 | coding | downstream | 781112 | 83954195 ~ 84332909 (-) |
| LOC110528630 | stl3 | coding | downstream | 1196907 | 83913871 ~ 83917114 (-) |
| stl3 | stl3 | coding | downstream | 1208755 | 83888444 ~ 83905266 (-) |
| LOC110528625 | LOC106583755 | coding | downstream | 1378524 | 83731185 ~ 83735497 (-) |
| LOC110528639 | LOC106583772 | coding | upstream | 26113 | 85141224 ~ 85169972 (-) |
| gmppb | gmppb | coding | upstream | 56007 | 85171118 ~ 85184654 (-) |
| LOC110529054 | ip6k1 | coding | upstream | 86048 | 85201159 ~ 85271192 (-) |
| ube2j2 | ube2j2 | coding | upstream | 260483 | 85375594 ~ 85388068 (-) |
| LOC110511195 | LOC106583764 | coding | upstream | 277744 | 85392855 ~ 85551720 (-) |
| G658286 | NA | non-coding | downstream | 26352 | 85087225 ~ 85087669 (-) |
| G658274 | NA | non-coding | downstream | 55244 | 85054242 ~ 85058777 (-) |
| G658273 | NA | non-coding | downstream | 55611 | 85053664 ~ 85058410 (-) |
| G658202 | NA | non-coding | downstream | 164168 | 84898565 ~ 84949853 (-) |
| G658187 | NA | non-coding | downstream | 246837 | 84866763 ~ 84867184 (-) |
| G658331 | NA | non-coding | upstream | 92646 | 85207757 ~ 85208924 (-) |
| G658341 | NA | non-coding | upstream | 115221 | 85230332 ~ 85231492 (-) |
| G658355 | NA | non-coding | upstream | 167308 | 85282419 ~ 85282699 (-) |
| G658356 | LOC100286442 | non-coding | upstream | 167965 | 85283076 ~ 85283378 (-) |
| G658255 | NA | other | downstream | 106516 | 85006726 ~ 85007505 (-) |
| G656671 | dag1 | other | downstream | 1498023 | 83608532 ~ 83615998 (-) |
| G656314 | NA | other | downstream | 1785841 | 83327479 ~ 83328180 (-) |
| G655715 | LOC106583745 | other | downstream | 2780723 | 82328398 ~ 82333651 (-) |
| G659250 | NA | other | upstream | 1045131 | 86160242 ~ 86160923 (-) |
| G659543 | NA | other | upstream | 1517296 | 86632407 ~ 86633856 (-) |
| G659824 | NA | other | upstream | 1888625 | 87003736 ~ 87007292 (-) |
| LOC110528667 | cenpp | other | upstream | 2169790 | 87114104 ~ 87293966 (-) |
| LOC110528687 | LOC106583825 | other | upstream | 3137952 | 88253063 ~ 88345745 (-) |
