G657609


Basic Information

Item Value
gene id G657609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 85198103 ~ 85200192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU747523
gtgcactactaTATagcgggaatagggtgccattttgatgGGATACTTTGTCTCTGACACAGCACCAGTTTCGTGGTTTGTATCGCTGCGGTGTAGACTTATTAATTTAACACAAATGCCCACTCTTTAAAAAAGGCTCAAACAAACAAACTATTCCCCGTTTTTTGGAAGATAGTAAGCTGctttgaaaatatatttattttggcatcttgaaatagttttttttcccctTCCATCTAAAAACTACTTTGTCCCTCCaaagcatttttttttcttctgggtTAATCAacctgaaaaatgtatttttggacAATAACACATTACAAAGCCCTGCCAAGTAGACTGATAAAGAGGCCACCATTCCCCACAGGTGGAAATTCCATTATCATATTTTTCCATATAAATTAGTTTGAAGAAGAGGTCTTGAATAAATAAGAATGAATTTGGAACTCTGGGGGTAAGAAAACAAAAATTTGTAACAGTTGTGACGAGGAGTGTGACTTTTGCGGGAGACTAAATTTTCTCCATAATGCCAAATAGAAACACACATAGAATTGGTTCTAGAATCAGAATAGAATCAGCATGCATGTAGTAGATAGATAGAACTCTAAACCAATAGAAAACCAGTAATTCTACAGTGTCTGTTTTTCAACATTGAATTGCATGTGTTGAAATTGAGTTTTTTTTACAGTTCTGGCCACATCCAAGTCAAGTTCATGTCCTTGTGTAGCAGTAGATAATATTAGTTATACGTAAAGATACGATATTATAGCATCCTAGTGCTTTGTAGTCAGAGTAGAGTAGCAAAGTGTTCCTGGTAACTTTCCCCATATCCCCAGAAGTCCTGATAAGCAGGAACCAGCCTATTTCATCCTCCGAGTCTGGGATTCTTCTAACTGGGAtgtggaaaacctgggaattttgaaACCCTGTCAAAGATATTAAACTATGACAAGACGCGCAACCGTGCCAgagcagagaagaagaaaaagaaaaaaaagaatccACATTAAACAAAATGTATCAAAGTGAATTAAAGCTACAGTGCACCATTATTCAACcaatctacacagagagagagacatcctaACCAACTGGGTGACACTCGACTAACAGACTATGGTGAGTGGGCTtggggaacagagggaggaggacacaGGAGAAGAAGAGGGTGAGAGTGGTGAAGGAGTGGAGtctctctactatcattctgCTACATGTGCTAAGATGGAGGACAAGGGTTCACTGTGTATCGGTGGTGAGAGagtagcagacctgggttcaaatgcttTTTCTTTAGCCTGCTTGCCTGGAGGGCCAGGTCATAGGCGGGATTTGCAGTTTTGAGACTATTCTATTGGTTACATTTTGCCAGGCAATAGGGTGCAATTTCAGACATACCCTgggttatttattttttcaattaAAACCCTGCtaaaaaagtatttgaaatgatttgaaaCCTATTTGAAGCCAGGTCTCTAGTCTGCCCCTCGACGTGACTTAACCGCCCCCAAAAGAAAACGAGTActataaaaaataagaaaaaaaaaaaatcaggctTTCAATACACCTTCTACAGCGCAAATTAAAAAAGATCATAAAATGAGAGAAAGGCTTAGTTTGTAAAACAGAGAGGGGCATCAATGTGTCTGGACTAAAGGACATGTGTTATACAGTGTCCCAATGGTATACCTGGACTGGGACGGGCCTAACTACCAGACTCTGGTATAGGgaggaaaaaaataaacaattataATATTATATCCACCTCATTTTCAAACGCTTTTTAAACACGGAAGCCAAACGACGAAACTATGGATACAACTTCTTCAACATGATCataataaaaacaatattttaaaaaaatcccTGCAATACCATGTTCCTGATGGCTGATACAACCTTTTACTGTTCTGCTAATGTGCCTGGACCTTTCAGACTAAACTGCCGAGAACAAACAGCCAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU747523 True 1970 lncRNA 0.39 2 85198103 85200192

Neighbor

gene id symbol gene type direction distance location
amigo3 amigo3 coding upstream 288742 84904628 ~ 84909361 (+)
LOC118965371 NA coding upstream 796584 84372197 ~ 84401519 (+)
LOC110528627 stl3 coding upstream 1316517 83878342 ~ 83881586 (+)
LOC118965393 NA coding upstream 1395503 83800611 ~ 83802600 (+)
nicn1 nicn1 coding upstream 1415638 83759738 ~ 83782465 (+)
LOC110528638 NA coding downstream 94036 85294228 ~ 85297684 (+)
LOC110528636 LOC106583767 coding downstream 101362 85301554 ~ 85363683 (+)
pusl1 pusl1 coding downstream 351601 85551793 ~ 85617931 (+)
tamm41 tamm41 coding downstream 430786 85630978 ~ 85648641 (+)
vgll4b vgll4 coding downstream 449653 85649845 ~ 85744794 (+)
G657599 NA non-coding upstream 14905 85182931 ~ 85183198 (+)
G657560 NA non-coding upstream 24605 85171231 ~ 85173498 (+)
G657592 NA non-coding upstream 29642 85168070 ~ 85168461 (+)
G657589 NA non-coding upstream 33159 85163595 ~ 85164944 (+)
G657587 NA non-coding upstream 35688 85162114 ~ 85162415 (+)
G657613 NA non-coding downstream 8244 85208436 ~ 85209164 (+)
G657619 NA non-coding downstream 16443 85216635 ~ 85216999 (+)
G657623 NA non-coding downstream 18851 85219043 ~ 85219441 (+)
G657643 NA non-coding downstream 56798 85256990 ~ 85257674 (+)
G658359 NA non-coding downstream 84308 85284500 ~ 85285005 (+)
G657481 NA other upstream 190605 85006479 ~ 85007498 (+)
G657292 NA other upstream 579386 84612829 ~ 84618717 (+)
G657254 NA other upstream 643330 84551996 ~ 84554773 (+)
G657228 NA other upstream 677685 84503549 ~ 84520418 (+)
G656551 NA other upstream 1637585 83558837 ~ 83560518 (+)
G658885 NA other downstream 686400 85886592 ~ 85887121 (+)
G658887 NA other downstream 695634 85895826 ~ 85896149 (+)
G659058 NA other downstream 1208510 86408702 ~ 86412974 (+)
G659136 NA other downstream 1320868 86521060 ~ 86521822 (+)
G659706 NA other downstream 1900272 87100464 ~ 87102270 (+)

Expression


Co-expression Network