G658611


Basic Information

Item Value
gene id G658611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 85294521 ~ 85295768 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU748752
AGGGACAATCATATTACAGGGTTCATTTGAAAAAGAGAAACTAGGTCTCAAAAAAACTACATGTTGAAATAAAGGTGACATATTTGTTTTGATTATAAAGATTGTAGACCGTATATTGTATAAAATATAACAAATAAATACTGAAAAAGAAAGACCTTGGTATCCCAACTGCTGCTTCCTGTCCTAGACTACTACGGTGACATCATCTATCAAAACACAACCAAGACCTTCATTTCTTCCCTTCTTTTAGTGCTCTCTGACCACTGTGCCTCATTCTCCTCCAGAAACTCTGTAGCTTGATCCTCACACCAGAgtctgtgtctgtctgttatttCCTATCCacgcctccatctcctcctcttcctcctgtctgtctgctatctGGTCCCAGATCTCAGTGTTGACAACCAGAGAACCAGCAAAGGGTAGGCTGACCTGGCTACAGGTGATCCAGCGACACAGAGGGCAGCACGCGGTCAGGAGGCCACTCTGGAGCCTGGAGATTGTCTCCAAGCACGGCCCACAGAAGGTGTGTTCACAGTGGAGCACCCGAGGGATTTTCTCCCTGCGAGAGTAGGGTTGGAAGCAGACGCAACAATTCATGTCTTCACTCATCAGACCCATGGCTGGTTGGCTGGGGtgtggagggatgaatggatggatagaCGGATGGACAGCTGGAGCACAGGAGGAACTCTGGATGGAGAGCAGTGTCTGGACAGGAAGACGTGGGGTTTAAATGCTGGTCTCAGGTCCGTTTTCCCCTTTGTGGATTATTAAGGTCCTGGTTTGGATTTGACGAGggtgagctgatcctagatctgtcctTTGGAGCATGGATCAGGAAGCTGCAATAGACATCA

Function

NR:

description
PREDICTED: RING finger protein 208-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU748752 True 863 lncRNA 0.47 2 85294521 85295768
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529054 ip6k1 coding downstream 23331 85201159 ~ 85271192 (-)
gmppb gmppb coding downstream 109867 85171118 ~ 85184654 (-)
LOC110528639 LOC106583772 coding downstream 124549 85141224 ~ 85169972 (-)
LOC110528641 terf2ip coding downstream 174621 85106971 ~ 85119900 (-)
LOC110529055 rnf123 coding downstream 187825 84844331 ~ 85106696 (-)
ube2j2 ube2j2 coding upstream 79826 85375594 ~ 85388068 (-)
LOC110511195 LOC106583764 coding upstream 97087 85392855 ~ 85551720 (-)
LOC118965326 NA coding upstream 262139 85557907 ~ 85558332 (-)
atg7 atg7 coding upstream 468870 85764638 ~ 85855852 (-)
hrh1 hrh1 coding upstream 560921 85856689 ~ 85864549 (-)
G658610 NA non-coding downstream 355 85293847 ~ 85294166 (-)
G658606 NA non-coding downstream 10241 85284070 ~ 85284280 (-)
G658356 LOC100286442 non-coding downstream 11143 85283076 ~ 85283378 (-)
G658355 NA non-coding downstream 11822 85282419 ~ 85282699 (-)
G658612 NA non-coding upstream 33 85295801 ~ 85331017 (-)
G658624 NA non-coding upstream 8411 85304179 ~ 85305180 (-)
G658638 NA non-coding upstream 9603 85305371 ~ 85307623 (-)
G658652 LOC106583767 non-coding upstream 37168 85332936 ~ 85337643 (-)
G658656 NA non-coding upstream 43816 85339584 ~ 85343351 (-)
G658255 NA other downstream 287016 85006726 ~ 85007505 (-)
LOC110528632 LOC105007334 other downstream 1337753 83954195 ~ 84332909 (-)
G656671 dag1 other downstream 1678523 83608532 ~ 83615998 (-)
G656314 NA other downstream 1966341 83327479 ~ 83328180 (-)
G655715 LOC106583745 other downstream 2961223 82328398 ~ 82333651 (-)
G659250 NA other upstream 864474 86160242 ~ 86160923 (-)
G659543 NA other upstream 1336639 86632407 ~ 86633856 (-)
G659824 NA other upstream 1707968 87003736 ~ 87007292 (-)
LOC110528667 cenpp other upstream 1989133 87114104 ~ 87293966 (-)
LOC110528687 LOC106583825 other upstream 2957295 88253063 ~ 88345745 (-)

Expression

G658611 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.75.
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G658611 Expression in each Bioproject

Bar chart with 10 bars.
G658611 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network