G658365


Basic Information

Item Value
gene id G658365
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 85299918 ~ 85300437 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU748459
agagatggcaggagcaggttaaaagcctgacatagacagtgatggtgtagagatgacaggagcaggtttaaagcctgatatagacagtgatggtgtagagatgacaggagcaggtttaaagcctgatatagacagtgatggtgtagagatgacaggagcaggttaatagcctgatatggacagtgatggtgtagagatgacaggtttaaagcctgatatagacagtgatggtgtagagatgacaggtttaaagcctgatatagacagtgattgtgtagagatgacaggagcaGTGGAATAGAGATACTAAAGGCAGGCATTTATTTCAAGTACAGAGGAAAGTCTGGAAAGGGAGGACGGCAGGAAGGGACAGTAGAGAGGAGGCTAT

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU748459 True 388 lncRNA 0.45 2 85299918 85300437

Neighbor

gene id symbol gene type direction distance location
LOC110528638 NA coding upstream 2234 85294228 ~ 85297684 (+)
amigo3 amigo3 coding upstream 390557 84904628 ~ 84909361 (+)
LOC118965371 NA coding upstream 898399 84372197 ~ 84401519 (+)
LOC110528627 stl3 coding upstream 1418332 83878342 ~ 83881586 (+)
LOC118965393 NA coding upstream 1497318 83800611 ~ 83802600 (+)
LOC110528636 LOC106583767 coding downstream 1117 85301554 ~ 85363683 (+)
pusl1 pusl1 coding downstream 251356 85551793 ~ 85617931 (+)
tamm41 tamm41 coding downstream 330541 85630978 ~ 85648641 (+)
vgll4b vgll4 coding downstream 349408 85649845 ~ 85744794 (+)
LOC110528658 slc6a1 coding downstream 717638 86018075 ~ 86033561 (+)
G658362 NA non-coding upstream 11265 85288451 ~ 85288653 (+)
G658360 NA non-coding upstream 14038 85285111 ~ 85285880 (+)
G658359 NA non-coding upstream 14913 85284500 ~ 85285005 (+)
G657643 NA non-coding upstream 42244 85256990 ~ 85257674 (+)
G657623 NA non-coding upstream 80477 85219043 ~ 85219441 (+)
G658369 NA non-coding downstream 2971 85303408 ~ 85305131 (+)
G658370 NA non-coding downstream 9884 85310321 ~ 85352511 (+)
G658392 NA non-coding downstream 66590 85367027 ~ 85372293 (+)
G658386 NA non-coding downstream 75164 85375601 ~ 85378510 (+)
G658398 NA non-coding downstream 83575 85384012 ~ 85384468 (+)
G657481 NA other upstream 292420 85006479 ~ 85007498 (+)
G657292 NA other upstream 681201 84612829 ~ 84618717 (+)
G657254 NA other upstream 745145 84551996 ~ 84554773 (+)
G657228 NA other upstream 779500 84503549 ~ 84520418 (+)
G656551 NA other upstream 1739400 83558837 ~ 83560518 (+)
G658885 NA other downstream 586155 85886592 ~ 85887121 (+)
G658887 NA other downstream 595389 85895826 ~ 85896149 (+)
G659058 NA other downstream 1108265 86408702 ~ 86412974 (+)
G659136 NA other downstream 1220623 86521060 ~ 86521822 (+)
G659706 NA other downstream 1800027 87100464 ~ 87102270 (+)

Expression


Co-expression Network