Gene
RNA
| Item | Value |
|---|---|
| gene id | G658652 |
| gene name | LOC106583767 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 85332936 ~ 85337643 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| homeodomain-interacting protein kinase 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU748793 | True | 486 | lncRNA | 0.54 | 3 | 85332936 | 85337643 |
85,326,000
85,327,000
85,328,000
85,329,000
85,330,000
85,331,000
85,332,000
85,333,000
85,334,000
85,335,000
85,336,000
85,337,000
85,338,000
85,339,000
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529054 | ip6k1 | coding | downstream | 61746 | 85201159 ~ 85271192 (-) |
| gmppb | gmppb | coding | downstream | 148282 | 85171118 ~ 85184654 (-) |
| LOC110528639 | LOC106583772 | coding | downstream | 162964 | 85141224 ~ 85169972 (-) |
| LOC110528641 | terf2ip | coding | downstream | 213036 | 85106971 ~ 85119900 (-) |
| LOC110529055 | rnf123 | coding | downstream | 226240 | 84844331 ~ 85106696 (-) |
| ube2j2 | ube2j2 | coding | upstream | 37951 | 85375594 ~ 85388068 (-) |
| LOC110511195 | LOC106583764 | coding | upstream | 55212 | 85392855 ~ 85551720 (-) |
| LOC118965326 | NA | coding | upstream | 220264 | 85557907 ~ 85558332 (-) |
| atg7 | atg7 | coding | upstream | 426995 | 85764638 ~ 85855852 (-) |
| hrh1 | hrh1 | coding | upstream | 519046 | 85856689 ~ 85864549 (-) |
| G658612 | NA | non-coding | downstream | 1919 | 85295801 ~ 85331017 (-) |
| G658638 | NA | non-coding | downstream | 25313 | 85305371 ~ 85307623 (-) |
| G658624 | NA | non-coding | downstream | 27756 | 85304179 ~ 85305180 (-) |
| G658611 | NA | non-coding | downstream | 37168 | 85294521 ~ 85295768 (-) |
| G658610 | NA | non-coding | downstream | 38770 | 85293847 ~ 85294166 (-) |
| G658656 | NA | non-coding | upstream | 1941 | 85339584 ~ 85343351 (-) |
| G658665 | NA | non-coding | upstream | 19047 | 85356690 ~ 85357137 (-) |
| G658681 | NA | non-coding | upstream | 84870 | 85422513 ~ 85424262 (-) |
| G658685 | NA | non-coding | upstream | 102368 | 85440011 ~ 85441863 (-) |
| G658716 | NA | non-coding | upstream | 221358 | 85559001 ~ 85560774 (-) |
| G658255 | NA | other | downstream | 325431 | 85006726 ~ 85007505 (-) |
| LOC110528632 | LOC105007334 | other | downstream | 1376168 | 83954195 ~ 84332909 (-) |
| G656671 | dag1 | other | downstream | 1716938 | 83608532 ~ 83615998 (-) |
| G656314 | NA | other | downstream | 2004756 | 83327479 ~ 83328180 (-) |
| G655715 | LOC106583745 | other | downstream | 2999638 | 82328398 ~ 82333651 (-) |
| G659250 | NA | other | upstream | 822599 | 86160242 ~ 86160923 (-) |
| G659543 | NA | other | upstream | 1294764 | 86632407 ~ 86633856 (-) |
| G659824 | NA | other | upstream | 1666093 | 87003736 ~ 87007292 (-) |
| LOC110528667 | cenpp | other | upstream | 1947258 | 87114104 ~ 87293966 (-) |
| LOC110528687 | LOC106583825 | other | upstream | 2915420 | 88253063 ~ 88345745 (-) |
