XLOC_025655 (dre-mir-193b)


Basic Information

Item Value
gene id XLOC_025655
gene name dre-mir-193b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 43714699 ~ 43714783 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050506
GTGATTTCAGTGACGGGACTTTGGGGGCGAGATGAGTATTGATCTCTATCCAACTGGCCCGCAAAGTCCCGCTTCTGGGACTCAC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104984

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050506 True 85 miRNA 0.54 1 43714699 43714783

Neighbor

gene id symbol gene type direction distance location
XLOC_025653 NA coding upstream 27042 43685664 ~ 43687657 (+)
XLOC_025652 CU138533.2 coding upstream 60908 43650041 ~ 43653791 (+)
XLOC_025651 galr2b coding upstream 235650 43460696 ~ 43479049 (+)
XLOC_025650 zfand2a coding upstream 317565 43373867 ~ 43397134 (+)
XLOC_025649 NA coding upstream 385940 43200317 ~ 43328759 (+)
XLOC_025656 dre-mir-365-1 coding downstream 2044 43716827 ~ 43716915 (+)
XLOC_025657 zc3h7a coding downstream 59586 43774369 ~ 43808322 (+)
XLOC_025658 litaf coding downstream 111002 43825785 ~ 43831030 (+)
XLOC_025659 BX571715.1 coding downstream 241081 43955864 ~ 43987286 (+)
XLOC_025660 NA coding downstream 285510 44000293 ~ 44053770 (+)
XLOC_025429 BX649540.1 misc upstream 13465663 30248739 ~ 30249036 (+)
XLOC_025648 NA non-coding upstream 579206 43102010 ~ 43135493 (+)
XLOC_025643 NA non-coding upstream 959531 42754657 ~ 42755168 (+)
XLOC_025662 CR385066.1 non-coding downstream 1173254 44888037 ~ 44888153 (+)
XLOC_025664 NA non-coding downstream 1531254 45246037 ~ 45253532 (+)
XLOC_025667 CR392042.1 non-coding downstream 1887562 45602345 ~ 45606457 (+)

Expression


Co-expression Network