G658557


Basic Information

Item Value
gene id G658557
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 85695826 ~ 85696087 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU748688
ACACATTATGCCATGGTGTAGAGAAAAATATGCAATGTTTTAATGAGATTCATCGCATTCTGTCATGATGCTAAGAAAATGCAATTTAAAGATAATTTTCCACCCTCGTGGCAAAAAGtgaagaattgcaggaaattaacagTTTTTATTGCTCATCTCATGATTTTGTTCACATTTTGACATGAGGCTGAGAATtttacagttttaaagctaatttccctCCAATTCTACACTTTTGTAATgttaccccctttttcctccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU748688 True 262 lncRNA 0.34 1 85695826 85696087

Neighbor

gene id symbol gene type direction distance location
tamm41 tamm41 coding upstream 47185 85630978 ~ 85648641 (+)
pusl1 pusl1 coding upstream 77895 85551793 ~ 85617931 (+)
LOC110528636 LOC106583767 coding upstream 332143 85301554 ~ 85363683 (+)
LOC110528638 NA coding upstream 398142 85294228 ~ 85297684 (+)
amigo3 amigo3 coding upstream 786465 84904628 ~ 84909361 (+)
LOC110528658 slc6a1 coding downstream 321988 86018075 ~ 86033561 (+)
atp2b2 LOC106566233 coding downstream 406176 86102263 ~ 86305534 (+)
slc6a11b slc6a11 coding downstream 648638 86344725 ~ 86406029 (+)
LOC110488455 LOC106583799 coding downstream 1289464 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 1308829 86927892 ~ 87007309 (+)
G658553 NA non-coding upstream 2497 85693026 ~ 85693329 (+)
G658534 NA non-coding upstream 24546 85656759 ~ 85671280 (+)
G658532 NA non-coding upstream 40973 85654534 ~ 85654853 (+)
G658481 NA non-coding upstream 57531 85637327 ~ 85638295 (+)
G658525 NA non-coding upstream 71788 85623217 ~ 85624038 (+)
G658561 NA non-coding downstream 7897 85703984 ~ 85704347 (+)
G658572 NA non-coding downstream 29971 85726058 ~ 85726308 (+)
G658573 NA non-coding downstream 32367 85728454 ~ 85729104 (+)
G658476 NA non-coding downstream 50237 85746324 ~ 85747415 (+)
G658477 NA non-coding downstream 52591 85748678 ~ 85748957 (+)
G657481 NA other upstream 688328 85006479 ~ 85007498 (+)
G657292 NA other upstream 1077109 84612829 ~ 84618717 (+)
G657254 NA other upstream 1141053 84551996 ~ 84554773 (+)
G657228 NA other upstream 1175408 84503549 ~ 84520418 (+)
G656551 NA other upstream 2135308 83558837 ~ 83560518 (+)
G658885 NA other downstream 190505 85886592 ~ 85887121 (+)
G658887 NA other downstream 199739 85895826 ~ 85896149 (+)
G659058 NA other downstream 712615 86408702 ~ 86412974 (+)
G659136 NA other downstream 824973 86521060 ~ 86521822 (+)
G659706 NA other downstream 1404377 87100464 ~ 87102270 (+)

Expression


Co-expression Network