G658846


Basic Information

Item Value
gene id G658846
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 85746245 ~ 85747416 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU749036
ggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagagatggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatacgttacagtggggtgctagagaggaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagaggaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagagatggagggtagaggacgggagacgatactttacagtggggtgctagagaggaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagaggaggagggtagaggacgggatacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagagatggagggtagaggacgggagacgatactttacagtggggtgctagagaggaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatacgttacagtggggtgctagagaggaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtggggtgctagagaggaggagggtagaggacgggagacgatactttacagtggggtgctagagaggaggagggtagaggacgggagacgatactttacagtggggtgctagagaagaggagggtagaggacgggagacgatactttacagtgaggtgctagagaagaggagggtagaggacgggagacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU749036 True 1172 lncRNA 0.55 1 85746245 85747416

Neighbor

gene id symbol gene type direction distance location
LOC118965326 NA coding downstream 187913 85557907 ~ 85558332 (-)
LOC110511195 LOC106583764 coding downstream 194525 85392855 ~ 85551720 (-)
ube2j2 ube2j2 coding downstream 358177 85375594 ~ 85388068 (-)
LOC110529054 ip6k1 coding downstream 475055 85201159 ~ 85271192 (-)
gmppb gmppb coding downstream 561591 85171118 ~ 85184654 (-)
atg7 atg7 coding upstream 17222 85764638 ~ 85855852 (-)
hrh1 hrh1 coding upstream 109273 85856689 ~ 85864549 (-)
LOC118965394 NA coding upstream 257432 86004625 ~ 86007056 (-)
slc6a1b slc6a1 coding upstream 770078 86517494 ~ 86549674 (-)
LOC110528661 dusp7 coding upstream 938856 86686272 ~ 86704088 (-)
G658845 NA non-coding downstream 922 85745025 ~ 85745323 (-)
G658823 NA non-coding downstream 43930 85701934 ~ 85702315 (-)
G658821 NA non-coding downstream 49954 85696090 ~ 85696291 (-)
G658819 NA non-coding downstream 59723 85686296 ~ 85686522 (-)
G658815 NA non-coding downstream 74348 85671646 ~ 85671897 (-)
G658847 NA non-coding upstream 1265 85748681 ~ 85749639 (-)
G658732 NA non-coding upstream 15315 85762731 ~ 85764568 (-)
G658851 NA non-coding upstream 20984 85768400 ~ 85776747 (-)
G658855 NA non-coding upstream 30135 85777551 ~ 85778805 (-)
G658857 NA non-coding upstream 37298 85784714 ~ 85785002 (-)
G658255 NA other downstream 738740 85006726 ~ 85007505 (-)
LOC110528632 LOC105007334 other downstream 1789477 83954195 ~ 84332909 (-)
G656671 dag1 other downstream 2130247 83608532 ~ 83615998 (-)
G656314 NA other downstream 2418065 83327479 ~ 83328180 (-)
G655715 LOC106583745 other downstream 3412947 82328398 ~ 82333651 (-)
G659250 NA other upstream 412826 86160242 ~ 86160923 (-)
G659543 NA other upstream 884991 86632407 ~ 86633856 (-)
G659824 NA other upstream 1256320 87003736 ~ 87007292 (-)
LOC110528667 cenpp other upstream 1537485 87114104 ~ 87293966 (-)
LOC110528687 LOC106583825 other upstream 2505647 88253063 ~ 88345745 (-)

Expression


Co-expression Network