G658472


Basic Information

Item Value
gene id G658472
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 85755666 ~ 85756582 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU748589
ttttatttttaaaaggtTAAAGTGCAGGAACACAGTAATTATATGAAAACACTGCAATGATGATAGCCACTTGTGTATTATGATGATAGCCACTTGTGTATTATGATGATAGCCACTTGTGTATTTTGgCAGTTATAATGTTACATAAAGGCTACTCAGCAGACACTCTACAAAGACATAACGGTTATGTCCCAACAATCACCGGATTCCCTATATAAGGAATTGTGTCATTTGTAACCAATCCTCTTTATTTCAACCATTTGCCTCTTGAGACAattgaacaaaaaaatatatcgTTGTCATCCATCTTGTTTGACTTTTTTTTGTGATCCAGTAATAACAGGTGTATAGCCAGATGGTCATCCAACCAGTTTGGGATAAAGATGCCACTGTATTAGCTATGTTATTTAATGGAAGATCCCAGGAAGACTGGCTGTGTGCTTCCACATCAGTGATATGCATCCAAAATGGCCCCGTTTCCCTGTATATTGTACTAGTCAACAACAGATACAAAGGGAATTAGGTACCATTTCAGATACAACCAATGAGACACTAAATATTCAAGTTCCTTCACTTGGAAGCTGCACCAACATTGCAGTATTCTGTATTCTACTGTCCATGCTGTTAGTAAATCTGTGTTAAACCTTCATTTTTTGTGGCCTTGTTCCTCCAACTAAAAAGGTTTTGGCAGGCCACCTTTTTTTTTGTACTTAAGTAGTATTGATGAACAATAAACTGCTCTTAAACCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU748589 True 750 lncRNA 0.37 2 85755666 85756582

Neighbor

gene id symbol gene type direction distance location
vgll4b vgll4 coding upstream 10872 85649845 ~ 85744794 (+)
tamm41 tamm41 coding upstream 107025 85630978 ~ 85648641 (+)
pusl1 pusl1 coding upstream 137735 85551793 ~ 85617931 (+)
LOC110528636 LOC106583767 coding upstream 391983 85301554 ~ 85363683 (+)
LOC110528638 NA coding upstream 457982 85294228 ~ 85297684 (+)
LOC110528658 slc6a1 coding downstream 261493 86018075 ~ 86033561 (+)
atp2b2 LOC106566233 coding downstream 345681 86102263 ~ 86305534 (+)
slc6a11b slc6a11 coding downstream 588143 86344725 ~ 86406029 (+)
LOC110488455 LOC106583799 coding downstream 1228969 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 1248334 86927892 ~ 87007309 (+)
G658473 NA non-coding upstream 114 85752533 ~ 85755552 (+)
G658479 NA non-coding upstream 3470 85751840 ~ 85752196 (+)
G658482 NA non-coding upstream 6035 85749040 ~ 85749631 (+)
G658477 NA non-coding upstream 6709 85748678 ~ 85748957 (+)
G658476 NA non-coding upstream 8251 85746324 ~ 85747415 (+)
G658583 NA non-coding downstream 28106 85784688 ~ 85785146 (+)
G658594 NA non-coding downstream 67650 85824232 ~ 85824585 (+)
G658605 NA non-coding downstream 107597 85864179 ~ 85864543 (+)
G658878 NA non-coding downstream 113913 85870495 ~ 85870971 (+)
G658884 NA non-coding downstream 119186 85875768 ~ 85875990 (+)
G657481 NA other upstream 748168 85006479 ~ 85007498 (+)
G657292 NA other upstream 1136949 84612829 ~ 84618717 (+)
G657254 NA other upstream 1200893 84551996 ~ 84554773 (+)
G657228 NA other upstream 1235248 84503549 ~ 84520418 (+)
G656551 NA other upstream 2195148 83558837 ~ 83560518 (+)
G658885 NA other downstream 130010 85886592 ~ 85887121 (+)
G658887 NA other downstream 139244 85895826 ~ 85896149 (+)
G659058 NA other downstream 652120 86408702 ~ 86412974 (+)
G659136 NA other downstream 764478 86521060 ~ 86521822 (+)
G659706 NA other downstream 1343882 87100464 ~ 87102270 (+)

Expression


Co-expression Network