G658605


Basic Information

Item Value
gene id G658605
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 85864179 ~ 85864543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU748745
CACCCACCCACCTTCTTTATCTAGACTCGGAGAGCAGGGCGCATTCAAGGTCTACACTCTACTTACGTTTTATTACATTATTGCTTCAGCAACTGTTTACGAAGAGGATTATACAGTATAATCACAGCCTTCGATATTCTGTTGAGATATCCTCTTCGTCAACAGTCGCTGACAGAACAACGTAACATTCTGTAAACATGTTAGGTCTATGTTATAATATCTCTTGGACCGTACAACTGGACACCAGTCTATAGTCTACCGTTGGGTTTAGCAGGACCAGAGCTAACTTCATAATCTCGAAACCACAGAGGATCCAGAGGAtcactgtattatactgtatctcacaagattatactgtattatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU748745 True 365 lncRNA 0.41 1 85864179 85864543

Neighbor

gene id symbol gene type direction distance location
vgll4b vgll4 coding upstream 119385 85649845 ~ 85744794 (+)
tamm41 tamm41 coding upstream 215538 85630978 ~ 85648641 (+)
pusl1 pusl1 coding upstream 246248 85551793 ~ 85617931 (+)
LOC110528636 LOC106583767 coding upstream 500496 85301554 ~ 85363683 (+)
LOC110528638 NA coding upstream 566495 85294228 ~ 85297684 (+)
LOC110528658 slc6a1 coding downstream 153532 86018075 ~ 86033561 (+)
atp2b2 LOC106566233 coding downstream 237720 86102263 ~ 86305534 (+)
slc6a11b slc6a11 coding downstream 480182 86344725 ~ 86406029 (+)
LOC110488455 LOC106583799 coding downstream 1121008 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 1140373 86927892 ~ 87007309 (+)
G658594 NA non-coding upstream 39594 85824232 ~ 85824585 (+)
G658583 NA non-coding upstream 79033 85784688 ~ 85785146 (+)
G658472 NA non-coding upstream 107597 85755666 ~ 85756582 (+)
G658473 NA non-coding upstream 108627 85752533 ~ 85755552 (+)
G658479 NA non-coding upstream 111983 85751840 ~ 85752196 (+)
G658878 NA non-coding downstream 5952 85870495 ~ 85870971 (+)
G658884 NA non-coding downstream 11225 85875768 ~ 85875990 (+)
G658888 NA non-coding downstream 33558 85898101 ~ 85898316 (+)
G658890 NA non-coding downstream 73179 85937722 ~ 85939442 (+)
G658902 NA non-coding downstream 97042 85961585 ~ 85961887 (+)
G657481 NA other upstream 856681 85006479 ~ 85007498 (+)
G657292 NA other upstream 1245462 84612829 ~ 84618717 (+)
G657254 NA other upstream 1309406 84551996 ~ 84554773 (+)
G657228 NA other upstream 1343761 84503549 ~ 84520418 (+)
G656551 NA other upstream 2303661 83558837 ~ 83560518 (+)
G658885 NA other downstream 22049 85886592 ~ 85887121 (+)
G658887 NA other downstream 31283 85895826 ~ 85896149 (+)
G659058 NA other downstream 544159 86408702 ~ 86412974 (+)
G659136 NA other downstream 656517 86521060 ~ 86521822 (+)
G659706 NA other downstream 1235921 87100464 ~ 87102270 (+)

Expression


Co-expression Network