G658976


Basic Information

Item Value
gene id G658976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 86162387 ~ 86163235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU749255
gaatacaacaggtgtaggtagaccttacagtgaaatgctgacttactctaaccaatagtgcaactctaaccaatagtgcaaaaaaggtgttaggtgaacaataggtaagtaaagaaatcaaaacaacagtaacaagacaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagagaggctatatacagtagaggctatatacagtagagaggctatatacagtagaggctatatacagtagaggctatatacagtagaggctatatacagtagagaggttatatacagtagagaggttatatacagtagaggctatatacagtagaggctatatacagtagagaggttatatacagtagagaggctatatacagtagagaggctatacacagtagagaggctatacacagtagagaggctatacacagtagagaggctatacacagtagagaggctatatacagtagagaggacacatacag

Function

NR:

description
PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU749255 True 535 lncRNA 0.38 4 86162387 86163235

Neighbor

gene id symbol gene type direction distance location
LOC110528658 slc6a1 coding upstream 128826 86018075 ~ 86033561 (+)
vgll4b vgll4 coding upstream 417593 85649845 ~ 85744794 (+)
tamm41 tamm41 coding upstream 513746 85630978 ~ 85648641 (+)
pusl1 pusl1 coding upstream 544456 85551793 ~ 85617931 (+)
LOC110528636 LOC106583767 coding upstream 798704 85301554 ~ 85363683 (+)
slc6a11b slc6a11 coding downstream 181490 86344725 ~ 86406029 (+)
LOC110488455 LOC106583799 coding downstream 822316 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 841681 86927892 ~ 87007309 (+)
si:dkey-42i9.4 btg1 coding downstream 891279 87054514 ~ 87056155 (+)
ippk ippk coding downstream 902927 87066162 ~ 87106788 (+)
G658973 NA non-coding upstream 9758 86152262 ~ 86152629 (+)
G658968 NA non-coding upstream 17852 86143126 ~ 86144535 (+)
G658962 NA non-coding upstream 30840 86129976 ~ 86131547 (+)
G658934 NA non-coding upstream 85668 86069510 ~ 86076719 (+)
G658927 NA non-coding upstream 148583 86011027 ~ 86013804 (+)
G658979 NA non-coding downstream 6487 86169722 ~ 86177016 (+)
G658980 NA non-coding downstream 11718 86174953 ~ 86179201 (+)
G659015 NA non-coding downstream 84944 86248179 ~ 86310320 (+)
G659019 NA non-coding downstream 93318 86256553 ~ 86257896 (+)
G659020 NA non-coding downstream 97514 86260749 ~ 86261368 (+)
G658887 NA other upstream 266238 85895826 ~ 85896149 (+)
G658885 NA other upstream 275266 85886592 ~ 85887121 (+)
G657481 NA other upstream 1154889 85006479 ~ 85007498 (+)
G657292 NA other upstream 1543670 84612829 ~ 84618717 (+)
G657254 NA other upstream 1607614 84551996 ~ 84554773 (+)
G659058 NA other downstream 245467 86408702 ~ 86412974 (+)
G659136 NA other downstream 357825 86521060 ~ 86521822 (+)
G659706 NA other downstream 937229 87100464 ~ 87102270 (+)
nisch LOC106583810 other downstream 1221664 87346077 ~ 87387283 (+)
G660790 NA other downstream 2259529 88422764 ~ 88427927 (+)

Expression


Co-expression Network