G658980



Basic Information


Item Value
gene id G658980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 86174953 ~ 86179201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU749259
tacctctcctgaatctagctaggactcctcccaccgggctatatacctctcctgaatctaggtaggactcctcccaccgggctatatacctctcctgaatctagctaggactcctcccacatggctatatacctctctcgaatctagctaggactcctctcaccgggctatatacctctcccgaatctagctaggactcctcccaccgggctatatacctctcccgaatctagctaggactcctcccacc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU749259 True 250 lncRNA 0.53 2 86174953 86179201

Neighbor


gene id symbol gene type direction distance location
LOC110528658 slc6a1 coding upstream 141392 86018075 ~ 86033561 (+)
vgll4b vgll4 coding upstream 430159 85649845 ~ 85744794 (+)
tamm41 tamm41 coding upstream 526312 85630978 ~ 85648641 (+)
pusl1 pusl1 coding upstream 557022 85551793 ~ 85617931 (+)
LOC110528636 LOC106583767 coding upstream 811270 85301554 ~ 85363683 (+)
slc6a11b slc6a11 coding downstream 165524 86344725 ~ 86406029 (+)
LOC110488455 LOC106583799 coding downstream 806350 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 825715 86927892 ~ 87007309 (+)
si:dkey-42i9.4 btg1 coding downstream 875313 87054514 ~ 87056155 (+)
ippk ippk coding downstream 886961 87066162 ~ 87106788 (+)
G658976 NA non-coding upstream 11718 86162387 ~ 86163235 (+)
G658973 NA non-coding upstream 22324 86152262 ~ 86152629 (+)
G658968 NA non-coding upstream 30418 86143126 ~ 86144535 (+)
G658962 NA non-coding upstream 43406 86129976 ~ 86131547 (+)
G658934 NA non-coding upstream 98234 86069510 ~ 86076719 (+)
G659015 NA non-coding downstream 68978 86248179 ~ 86310320 (+)
G659019 NA non-coding downstream 77352 86256553 ~ 86257896 (+)
G659020 NA non-coding downstream 81548 86260749 ~ 86261368 (+)
G659029 NA non-coding downstream 98293 86277494 ~ 86279601 (+)
atp2b2 LOC106566233 non-coding downstream 119483 86102263 ~ 86305534 (+)
G658887 NA other upstream 278804 85895826 ~ 85896149 (+)
G658885 NA other upstream 287832 85886592 ~ 85887121 (+)
G657481 NA other upstream 1167455 85006479 ~ 85007498 (+)
G657292 NA other upstream 1556236 84612829 ~ 84618717 (+)
G657254 NA other upstream 1620180 84551996 ~ 84554773 (+)
G659058 NA other downstream 229501 86408702 ~ 86412974 (+)
G659136 NA other downstream 341859 86521060 ~ 86521822 (+)
G659706 NA other downstream 921263 87100464 ~ 87102270 (+)
nisch LOC106583810 other downstream 1205698 87346077 ~ 87387283 (+)
G660790 NA other downstream 2243563 88422764 ~ 88427927 (+)

Expression



Co-expression Network