Item | Value |
---|---|
gene id | G658980 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048571.1 |
NCBI id | CM023225.2 |
chromosome length | 90918291 |
location | 86174953 ~ 86179201 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU749259 | True | 250 | lncRNA | 0.53 | 2 | 86174953 | 86179201 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110528658 | slc6a1 | coding | upstream | 141392 | 86018075 ~ 86033561 (+) |
vgll4b | vgll4 | coding | upstream | 430159 | 85649845 ~ 85744794 (+) |
tamm41 | tamm41 | coding | upstream | 526312 | 85630978 ~ 85648641 (+) |
pusl1 | pusl1 | coding | upstream | 557022 | 85551793 ~ 85617931 (+) |
LOC110528636 | LOC106583767 | coding | upstream | 811270 | 85301554 ~ 85363683 (+) |
slc6a11b | slc6a11 | coding | downstream | 165524 | 86344725 ~ 86406029 (+) |
LOC110488455 | LOC106583799 | coding | downstream | 806350 | 86985551 ~ 87051602 (+) |
LOC110488454 | NA | coding | downstream | 825715 | 86927892 ~ 87007309 (+) |
si:dkey-42i9.4 | btg1 | coding | downstream | 875313 | 87054514 ~ 87056155 (+) |
ippk | ippk | coding | downstream | 886961 | 87066162 ~ 87106788 (+) |
G658976 | NA | non-coding | upstream | 11718 | 86162387 ~ 86163235 (+) |
G658973 | NA | non-coding | upstream | 22324 | 86152262 ~ 86152629 (+) |
G658968 | NA | non-coding | upstream | 30418 | 86143126 ~ 86144535 (+) |
G658962 | NA | non-coding | upstream | 43406 | 86129976 ~ 86131547 (+) |
G658934 | NA | non-coding | upstream | 98234 | 86069510 ~ 86076719 (+) |
G659015 | NA | non-coding | downstream | 68978 | 86248179 ~ 86310320 (+) |
G659019 | NA | non-coding | downstream | 77352 | 86256553 ~ 86257896 (+) |
G659020 | NA | non-coding | downstream | 81548 | 86260749 ~ 86261368 (+) |
G659029 | NA | non-coding | downstream | 98293 | 86277494 ~ 86279601 (+) |
atp2b2 | LOC106566233 | non-coding | downstream | 119483 | 86102263 ~ 86305534 (+) |
G658887 | NA | other | upstream | 278804 | 85895826 ~ 85896149 (+) |
G658885 | NA | other | upstream | 287832 | 85886592 ~ 85887121 (+) |
G657481 | NA | other | upstream | 1167455 | 85006479 ~ 85007498 (+) |
G657292 | NA | other | upstream | 1556236 | 84612829 ~ 84618717 (+) |
G657254 | NA | other | upstream | 1620180 | 84551996 ~ 84554773 (+) |
G659058 | NA | other | downstream | 229501 | 86408702 ~ 86412974 (+) |
G659136 | NA | other | downstream | 341859 | 86521060 ~ 86521822 (+) |
G659706 | NA | other | downstream | 921263 | 87100464 ~ 87102270 (+) |
nisch | LOC106583810 | other | downstream | 1205698 | 87346077 ~ 87387283 (+) |
G660790 | NA | other | downstream | 2243563 | 88422764 ~ 88427927 (+) |