G659346


Basic Information

Item Value
gene id G659346
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 86385371 ~ 86385962 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU749783
CTAGTACCTAGTATTACCTAGTATTACCTAGTATTACCTAGTACCTAGTATTACCTAGTTCTGCACGCTAGTTGTACTGTCCGTAACAGGGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGGGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGGGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGGGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGAGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGGGTTCATATGTTAGAGGTGCTATAGGCTACACTATAAGAGCTGCTGGTACTTCAGGAGGAGCCATTCCTCTGTACCAGTCATCTTCAGCCCACTTCAATACCCTTcatctctgtcttttctctctctctctctctctctctctgactcaatcTTCAgaccactcctctttctctctctgactcaatCTTCAGAccacacctctttctctctctctc
>TU749786
CTAGTACCTAGTATTACCTAGTATTACCTAGTATTACCTAGTACCTAGTATTACCTAGTTCTGCACGCTAGTTGTACTGTCCGTAACAGGGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGGGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGGGTTCATATGTTAGAGGTGCTATAGGATATTACTGTACCAGGGTTCATATGTTAGAGGTGCTATAGGCTACACTATAAGAGCTGCTGGTACTTCAGGAGGAGCCATTCCTCTGTACCAGTCATCTTCAGCCCACTTCAATACCCTTcatctctgtcttttctctctctctctctctctctctctgactcaatcTTCAgaccactcctctttctctctctgactcaatCTTCAGAccacacctctttctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU749783 False 510 lncRNA 0.42 3 86385371 86385962
TU749786 True 428 lncRNA 0.43 3 86385371 86385962

Neighbor

gene id symbol gene type direction distance location
LOC118965394 NA coding downstream 378315 86004625 ~ 86007056 (-)
hrh1 hrh1 coding downstream 520822 85856689 ~ 85864549 (-)
atg7 atg7 coding downstream 529519 85764638 ~ 85855852 (-)
LOC118965326 NA coding downstream 827039 85557907 ~ 85558332 (-)
LOC110511195 LOC106583764 coding downstream 833651 85392855 ~ 85551720 (-)
slc6a1b slc6a1 coding upstream 131532 86517494 ~ 86549674 (-)
LOC110528661 dusp7 coding upstream 300310 86686272 ~ 86704088 (-)
LOC118965395 NA coding upstream 328317 86714279 ~ 86715176 (-)
poc1a poc1a coding upstream 337806 86723768 ~ 86820513 (-)
LOC110528663 LOC106583798 coding upstream 558835 86944797 ~ 86966992 (-)
G659332 NA non-coding downstream 32777 86351425 ~ 86352594 (-)
G659330 NA non-coding downstream 37291 86346795 ~ 86348080 (-)
G659327 NA non-coding downstream 43339 86341560 ~ 86342032 (-)
G659307 atp2b2 non-coding downstream 79843 86298347 ~ 86305528 (-)
G659308 NA non-coding downstream 89427 86294173 ~ 86295944 (-)
G659352 NA non-coding upstream 11601 86397563 ~ 86508406 (-)
G659348 NA non-coding upstream 19171 86405133 ~ 86412968 (-)
G659384 NA non-coding upstream 90878 86476840 ~ 86477584 (-)
G659385 NA non-coding upstream 95559 86481521 ~ 86482052 (-)
G659400 NA non-coding upstream 123891 86509853 ~ 86510166 (-)
G659250 NA other downstream 224448 86160242 ~ 86160923 (-)
G658255 NA other downstream 1377866 85006726 ~ 85007505 (-)
LOC110528632 LOC105007334 other downstream 2428603 83954195 ~ 84332909 (-)
G656671 dag1 other downstream 2769373 83608532 ~ 83615998 (-)
G656314 NA other downstream 3057191 83327479 ~ 83328180 (-)
G659543 NA other upstream 246445 86632407 ~ 86633856 (-)
G659824 NA other upstream 617774 87003736 ~ 87007292 (-)
LOC110528667 cenpp other upstream 898939 87114104 ~ 87293966 (-)
LOC110528687 LOC106583825 other upstream 1867101 88253063 ~ 88345745 (-)
G661128 NA other upstream 2373531 88759493 ~ 88759938 (-)

Expression


Co-expression Network