Gene
RNA
| Item | Value |
|---|---|
| gene id | G659101 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 86439587 ~ 86439928 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU749443 | True | 224 | lncRNA | 0.54 | 3 | 86439587 | 86439928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc6a11b | slc6a11 | coding | upstream | 33558 | 86344725 ~ 86406029 (+) |
| atp2b2 | LOC106566233 | coding | upstream | 134053 | 86102263 ~ 86305534 (+) |
| LOC110528658 | slc6a1 | coding | upstream | 406026 | 86018075 ~ 86033561 (+) |
| vgll4b | vgll4 | coding | upstream | 694793 | 85649845 ~ 85744794 (+) |
| tamm41 | tamm41 | coding | upstream | 790946 | 85630978 ~ 85648641 (+) |
| LOC110488455 | LOC106583799 | coding | downstream | 545623 | 86985551 ~ 87051602 (+) |
| LOC110488454 | NA | coding | downstream | 564988 | 86927892 ~ 87007309 (+) |
| si:dkey-42i9.4 | btg1 | coding | downstream | 614586 | 87054514 ~ 87056155 (+) |
| ippk | ippk | coding | downstream | 626234 | 87066162 ~ 87106788 (+) |
| ecm2 | ecm2 | coding | downstream | 676832 | 87116760 ~ 87156905 (+) |
| G659058 | NA | non-coding | upstream | 26613 | 86408702 ~ 86412974 (+) |
| G659077 | NA | non-coding | upstream | 54127 | 86384943 ~ 86385460 (+) |
| G659063 | NA | non-coding | upstream | 88990 | 86350196 ~ 86350597 (+) |
| G659060 | NA | non-coding | upstream | 92179 | 86346159 ~ 86347408 (+) |
| G659053 | NA | non-coding | upstream | 101972 | 86332579 ~ 86337615 (+) |
| G659102 | NA | non-coding | downstream | 6857 | 86446785 ~ 86447652 (+) |
| G659116 | NA | non-coding | downstream | 23039 | 86462967 ~ 86463705 (+) |
| G659150 | NA | non-coding | downstream | 133889 | 86573817 ~ 86574024 (+) |
| G659151 | NA | non-coding | downstream | 134282 | 86574210 ~ 86574747 (+) |
| G659152 | NA | non-coding | downstream | 134871 | 86574799 ~ 86575893 (+) |
| G658887 | NA | other | upstream | 543438 | 85895826 ~ 85896149 (+) |
| G658885 | NA | other | upstream | 552466 | 85886592 ~ 85887121 (+) |
| G657481 | NA | other | upstream | 1432089 | 85006479 ~ 85007498 (+) |
| G657292 | NA | other | upstream | 1820870 | 84612829 ~ 84618717 (+) |
| G659136 | NA | other | downstream | 81132 | 86521060 ~ 86521822 (+) |
| G659706 | NA | other | downstream | 660536 | 87100464 ~ 87102270 (+) |
| nisch | LOC106583810 | other | downstream | 944971 | 87346077 ~ 87387283 (+) |
| G660790 | NA | other | downstream | 1982836 | 88422764 ~ 88427927 (+) |
| G660853 | NA | other | downstream | 2182385 | 88622313 ~ 88689342 (+) |
