Gene
RNA
| Item | Value |
|---|---|
| gene id | G659153 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 86580132 ~ 86581061 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: SWI/SNF global transcription activator complex subunit snf59-like isoform X10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU749504 | True | 930 | lncRNA | 0.42 | 1 | 86580132 | 86581061 |
86,578,800
86,579,200
86,579,600
86,580,000
86,580,400
86,580,800
86,581,200
86,581,600
86,582,000
86,582,400
86,582,800
86,583,200
86,583,600
86,584,000
86,584,400
86,584,800
NC_048571.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc6a11b | slc6a11 | coding | upstream | 174103 | 86344725 ~ 86406029 (+) |
| atp2b2 | LOC106566233 | coding | upstream | 274598 | 86102263 ~ 86305534 (+) |
| LOC110528658 | slc6a1 | coding | upstream | 546571 | 86018075 ~ 86033561 (+) |
| vgll4b | vgll4 | coding | upstream | 835338 | 85649845 ~ 85744794 (+) |
| tamm41 | tamm41 | coding | upstream | 931491 | 85630978 ~ 85648641 (+) |
| LOC110488455 | LOC106583799 | coding | downstream | 404490 | 86985551 ~ 87051602 (+) |
| LOC110488454 | NA | coding | downstream | 423855 | 86927892 ~ 87007309 (+) |
| si:dkey-42i9.4 | btg1 | coding | downstream | 473453 | 87054514 ~ 87056155 (+) |
| ippk | ippk | coding | downstream | 485101 | 87066162 ~ 87106788 (+) |
| ecm2 | ecm2 | coding | downstream | 535699 | 87116760 ~ 87156905 (+) |
| G659152 | NA | non-coding | upstream | 4239 | 86574799 ~ 86575893 (+) |
| G659151 | NA | non-coding | upstream | 5385 | 86574210 ~ 86574747 (+) |
| G659150 | NA | non-coding | upstream | 6108 | 86573817 ~ 86574024 (+) |
| G659116 | NA | non-coding | upstream | 116427 | 86462967 ~ 86463705 (+) |
| G659102 | NA | non-coding | upstream | 132480 | 86446785 ~ 86447652 (+) |
| G659155 | NA | non-coding | downstream | 1314 | 86582375 ~ 86583535 (+) |
| G659157 | NA | non-coding | downstream | 5550 | 86586611 ~ 86587154 (+) |
| G659159 | NA | non-coding | downstream | 7202 | 86588263 ~ 86588469 (+) |
| G659452 | NA | non-coding | downstream | 94406 | 86675467 ~ 86681492 (+) |
| G659450 | NA | non-coding | downstream | 95387 | 86676448 ~ 86683269 (+) |
| G659136 | NA | other | upstream | 58310 | 86521060 ~ 86521822 (+) |
| G659058 | NA | other | upstream | 167547 | 86408702 ~ 86412974 (+) |
| G658887 | NA | other | upstream | 683983 | 85895826 ~ 85896149 (+) |
| G658885 | NA | other | upstream | 693011 | 85886592 ~ 85887121 (+) |
| G657481 | NA | other | upstream | 1572634 | 85006479 ~ 85007498 (+) |
| G659706 | NA | other | downstream | 519403 | 87100464 ~ 87102270 (+) |
| nisch | LOC106583810 | other | downstream | 803838 | 87346077 ~ 87387283 (+) |
| G660790 | NA | other | downstream | 1841703 | 88422764 ~ 88427927 (+) |
| G660853 | NA | other | downstream | 2041252 | 88622313 ~ 88689342 (+) |
| G660886 | NA | other | downstream | 2110833 | 88691894 ~ 88694076 (+) |
