G659155


Basic Information

Item Value
gene id G659155
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048571.1
NCBI id CM023225.2
chromosome length 90918291
location 86582375 ~ 86583535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU749506
gtataaacaagtctatatacgatgtgagcaaatgaggtgagataagggaggtaaaggcaaaaagaggccatggtggcaaagtaaatacaatatagcaagtaaaacactgcaatggtagatttgcagtggaagaatgtgcaaagtagaaatacaaataatggggtgcaaaggagcaaaataaataaataaaatacatacctggttaatacctggGCTATACCTGGTTAacacctgggttatacctggttaacacctgggttatacctgggctatacctggttaatacctgggttatacctgggctatacctggttaatacctggttaatacctgggttatacctggttaatacctggttaacacctgggttatacctgggcTATATCTGgttaatacctgggttatacctgggctatacctggttaatacctggttaatacctggttaatacctgggttatacctgggttatacctggttaatacctgggttatacctgggttatacctgggttatacctggttaatacctggttaatacctgggttatacctgggttatacctggttaaTGCCTGGGTTATACCTTgttaatacctgggttatacctgggttatacctgggctatacctggttaatacctgggttatacctgtttaatacctgggttatacctggttaatgcctgggttatacctggttaatacctggaatatacctggttaatacctgggttatacctgggctatacctggttaatacctgggttatacctgggttataccGGAGCTATATCTGGTTTATACCTGAGCTATACCTGGGCTATACTTGGGTTATACCTGGTTAAAACCTGAGCTATTCCTGGGTTATACCTGGCTATACCAGGgttatacctgggttatacctgagctatacctgggttatacctggccAGACAAGGGTTATACCTGGTATTAATTGGCTTTATCTGGGCTAAACCTGTGCTaaacctgggttatacctgggcTAAACCTGGATTATACCTGGgctatacctgggttatacctgagCTATACCTGGGTtttacctggctgtacctgggtTATACCAGGCtgtacctgggttatacctgagctgtacctgggttatacctgggatatacctgagctgtaCCTGGGTTATACC

Function

NR:

description
PREDICTED: filaggrin-2-like isoform X23

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU749506 True 1161 lncRNA 0.43 1 86582375 86583535

Neighbor

gene id symbol gene type direction distance location
slc6a11b slc6a11 coding upstream 176346 86344725 ~ 86406029 (+)
atp2b2 LOC106566233 coding upstream 276841 86102263 ~ 86305534 (+)
LOC110528658 slc6a1 coding upstream 548814 86018075 ~ 86033561 (+)
vgll4b vgll4 coding upstream 837581 85649845 ~ 85744794 (+)
tamm41 tamm41 coding upstream 933734 85630978 ~ 85648641 (+)
LOC110488455 LOC106583799 coding downstream 402016 86985551 ~ 87051602 (+)
LOC110488454 NA coding downstream 421381 86927892 ~ 87007309 (+)
si:dkey-42i9.4 btg1 coding downstream 470979 87054514 ~ 87056155 (+)
ippk ippk coding downstream 482627 87066162 ~ 87106788 (+)
ecm2 ecm2 coding downstream 533225 87116760 ~ 87156905 (+)
G659153 NA non-coding upstream 1314 86580132 ~ 86581061 (+)
G659152 NA non-coding upstream 6482 86574799 ~ 86575893 (+)
G659151 NA non-coding upstream 7628 86574210 ~ 86574747 (+)
G659150 NA non-coding upstream 8351 86573817 ~ 86574024 (+)
G659116 NA non-coding upstream 118670 86462967 ~ 86463705 (+)
G659157 NA non-coding downstream 3076 86586611 ~ 86587154 (+)
G659159 NA non-coding downstream 4728 86588263 ~ 86588469 (+)
G659452 NA non-coding downstream 91932 86675467 ~ 86681492 (+)
G659450 NA non-coding downstream 92913 86676448 ~ 86683269 (+)
G659451 NA non-coding downstream 101556 86685091 ~ 86686391 (+)
G659136 NA other upstream 60553 86521060 ~ 86521822 (+)
G659058 NA other upstream 169790 86408702 ~ 86412974 (+)
G658887 NA other upstream 686226 85895826 ~ 85896149 (+)
G658885 NA other upstream 695254 85886592 ~ 85887121 (+)
G657481 NA other upstream 1574877 85006479 ~ 85007498 (+)
G659706 NA other downstream 516929 87100464 ~ 87102270 (+)
nisch LOC106583810 other downstream 801364 87346077 ~ 87387283 (+)
G660790 NA other downstream 1839229 88422764 ~ 88427927 (+)
G660853 NA other downstream 2038778 88622313 ~ 88689342 (+)
G660886 NA other downstream 2108359 88691894 ~ 88694076 (+)

Expression


Co-expression Network