Gene
RNA
| Item | Value |
|---|---|
| gene id | G659553 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048571.1 |
| NCBI id | CM023225.2 |
| chromosome length | 90918291 |
| location | 86663528 ~ 86666153 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: collagen EMF1-alpha-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU750093 | False | 1778 | lncRNA | 0.41 | 4 | 86663528 | 86666153 |
| TU750098 | True | 1830 | lncRNA | 0.41 | 4 | 86663528 | 86666153 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc6a1b | slc6a1 | coding | downstream | 113854 | 86517494 ~ 86549674 (-) |
| LOC118965394 | NA | coding | downstream | 656472 | 86004625 ~ 86007056 (-) |
| hrh1 | hrh1 | coding | downstream | 798979 | 85856689 ~ 85864549 (-) |
| atg7 | atg7 | coding | downstream | 807676 | 85764638 ~ 85855852 (-) |
| LOC118965326 | NA | coding | downstream | 1105196 | 85557907 ~ 85558332 (-) |
| LOC110528661 | dusp7 | coding | upstream | 20119 | 86686272 ~ 86704088 (-) |
| LOC118965395 | NA | coding | upstream | 48126 | 86714279 ~ 86715176 (-) |
| poc1a | poc1a | coding | upstream | 57615 | 86723768 ~ 86820513 (-) |
| LOC110528663 | LOC106583798 | coding | upstream | 278644 | 86944797 ~ 86966992 (-) |
| atrip | atrip | coding | upstream | 341285 | 87007438 ~ 87053874 (-) |
| G659423 | NA | non-coding | downstream | 65525 | 86597677 ~ 86598003 (-) |
| G659421 | NA | non-coding | downstream | 69799 | 86593435 ~ 86593729 (-) |
| G659419 | NA | non-coding | downstream | 76470 | 86586589 ~ 86587058 (-) |
| G659412 | NA | non-coding | downstream | 117479 | 86545707 ~ 86546049 (-) |
| G659249 | NA | non-coding | downstream | 122812 | 86514022 ~ 86540716 (-) |
| G659558 | NA | non-coding | upstream | 8488 | 86674641 ~ 86679930 (-) |
| G659532 | NA | non-coding | upstream | 9308 | 86675461 ~ 86681451 (-) |
| G659536 | NA | non-coding | upstream | 10237 | 86676390 ~ 86682094 (-) |
| G659534 | NA | non-coding | upstream | 10708 | 86676861 ~ 86684069 (-) |
| G659560 | NA | non-coding | upstream | 11776 | 86677929 ~ 86678920 (-) |
| G659543 | NA | other | downstream | 29672 | 86632407 ~ 86633856 (-) |
| G659250 | NA | other | downstream | 502605 | 86160242 ~ 86160923 (-) |
| G658255 | NA | other | downstream | 1656023 | 85006726 ~ 85007505 (-) |
| LOC110528632 | LOC105007334 | other | downstream | 2706760 | 83954195 ~ 84332909 (-) |
| G656671 | dag1 | other | downstream | 3047530 | 83608532 ~ 83615998 (-) |
| G659824 | NA | other | upstream | 337583 | 87003736 ~ 87007292 (-) |
| LOC110528667 | cenpp | other | upstream | 618748 | 87114104 ~ 87293966 (-) |
| LOC110528687 | LOC106583825 | other | upstream | 1586910 | 88253063 ~ 88345745 (-) |
| G661128 | NA | other | upstream | 2093340 | 88759493 ~ 88759938 (-) |
| G661426 | LOC106583832 | other | upstream | 2386923 | 89053076 ~ 89061481 (-) |
